ENST00000622142.5 PRDM11

Information
Transcript ID
ENST00000622142.5
Genome
hg19
Position
chr11:45,168,894-45,256,661
Strand
+
CDS length
3,534
Amino acid length
1,178
Gene symbol
PRDM11
Gene type
protein-coding
Gene description
PR/SET domain 11
Gene Entrez Gene ID
56981
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,168,894 45,169,132
2 45,203,312 45,203,436
3 45,203,797 45,203,900
4 45,204,412 45,204,674
5 45,226,262 45,226,329
6 45,241,121 45,241,308
7 45,245,768 45,246,394
8 45,247,546 45,256,661
CDS
Exon number Type Start Stop
2 CDS 45,203,318 45,203,436
3 CDS 45,203,797 45,203,900
4 CDS 45,204,412 45,204,674
5 CDS 45,226,262 45,226,329
6 CDS 45,241,121 45,241,308
7 CDS 45,245,768 45,246,394
8 CDS 45,247,546 45,249,710
Other genome
Genome Chromosome Start End Links
hg38 chr11 45,147,343 45,235,110 Link
CDS sequence
ATGACCGAGAACATGAAGGAGTGCTTGGCCCAGACCAATGCAGCCGTGGGGGATATGGTGACGGTGGTGAAGACGGAGGTCTGCTCACCACTCCGAGACCAGGAGTATGGCCAGCCCTGCTCTAGGAGACCGGACTCCTCGGCCATGGAAGTTGAGCCCAAGAAACTGAAGGGGAAGCGCGACCTCATCGTGCCCAAAAGCTTCCAGCAAGTGGACTTCTGGTTCTGTGAGTCCTGCCAGGAGTACTTCGTGGATGAATGCCCAAACCATGGCCCCCCGGTGTTTGTGTCTGACACACCGGTGCCCGTGGGCATCCCAGACCGGGCGGCGCTCACCATCCCACAGGGCATGGAGGTGGTCAAGGACACTAGTGGAGAGAGTGACGTGCGATGTGTAAACGAGGTCATCCCCAAGGGCCACATCTTCGGCCCCTATGAGGGGCAGATCTCCACCCAGGACAAATCAGCTGGCTTCTTCTCCTGGCTGATTGTGGACAAGAACAACCGCTATAAGTCCATAGATGGCTCAGACGAGACCAAAGCCAACTGGATGAGGTACGTGGTCATCTCCCGGGAGGAGAGGGAGCAGAACCTGCTGGCGTTCCAGCACAGTGAGCGCATCTACTTCCGGGCGTGCAGGGACATCCGGCCTGGGGAGTGGCTGCGGGTCTGGTACAGCGAGGACTACATGAAGCGCCTGCACAGCATGTCCCAGGAAACCATTCACCGCAACCTGGCCAGAGGAGAGAAGAGGTTGCAGAGGGAGAAGTCTGAGCAGGTTCTGGATAACCCAGAAGACCTGAGGGGTCCCATTCATCTCTCTGTGCTGAGACAGGGCAAAAGTCCCTACAAGCGTGGCTTTGATGAGGGGGATGTACACCCCCAAGCTAAGAAGAAGAAAATTGACCTGATTTTCAAGGATGTTCTGGAGGCCTCACTGGAATCTGCGAAGGTGGAAGCCCACCAGTTGGCCCTGAGCACCTCACTGGTCATCAGGAAAGTCCCCAAATACCAGGATGACGCCTACAGTCAGTGTGCAACAACAATGACCCATGGTGTGCAGAATATAGGCCAGACCCAGGGGGAGGGGGACTGGAAGGTCCCCCAGGGGGTCTCCAAGGAGCCAGGCCAATTGGAGGATGAAGAAGAGGAGCCTTCATCATTCAAGGCCGACAGTCCTGCCGAGGCCTCCCTTGCATCTGACCCTCATGAACTTCCCACCACCTCTTTTTGCCCTAACTGTATTCGCCTAAAGAAGAAGGTTCGGGAGCTCCAGGCAGAATTAGACATGCTTAAGTCTGGGAAACTTCCTGAGCCCCCCGTATTGCCACCACAGGTACTGGAGCTCCCAGAGTTCTCGGACCCTGCAGCCTCAGAAAGCATGGTCTCCGGCCCCGCCATCATGGAGGATGATGACCAGGAAGTCGATTCAGCAGATGAATCTGTCTCCAATGATATGATGACAGCGACGGATGAGCCCTCCAAGATGTCATCGGCCACCGGGCGCCGAATCCGGCGCTTTAAGCAGGAATGGCTGAAGAAGTTCTGGTTCCTGCGGTACTCCCCAACCCTCAATGAGATGTGGTGCCACGTCTGCCGCCAGTACACGGTGCAGTCCTCACGCACCTCGGCCTTCATCATTGGCTCCAAGCAGTTTAAGATTCACACCATCAAACTTCACAGCCAGAGCAACCTGCACAAGAAGTGCCTGCAACTGTACAAGCTCCGCATGCACCCGGAGAAGACAGAGGAGATGTGTCGCAACATGACCCTGCTCTTCAACACCGCCTACCACCTGGCCTTGGAGGGCAGGCCCTACCTGGACTTCCGGCCCCTGGCGGAGCTGCTGAGGAAGTGTGAGCTCAAGGTGGTGGACCAGTACATGAATGAGGGAGACTGCCAGATCCTCATCCATCACATCGCCCGGGCCCTGCGGGAAGACCTGGTGGAGCGCATCCGCCAGTCACCTTGCCTCAGCGTCATCCTGGATGGGCAGAGCGACGACCTGCTGGCCGACACGGTGGCTGTCTATGTTCAGTACACCAGCAGTGATGGGCCCCCGGCCACAGAGTTCCTGTCCCTGCAGGAGCTGGGATTCTCTAGCACAGAAAGCTATCTCCAGGCACTTGACCGGGCCTTCTCGGCCTTGGGCATCCGGTTGCAGGATGAAAAGCCAACTGTTGGCTTGGGTGTAGATGGAGCCAACATCACAGCCAGCCTCCGTGCCAGCATGTTCATGACCATCCGCAAGACGCTGCCCTGGCTGCTGTGCCTGCCCTTCATGGTGCACCGGCCCCACCTGGAGATCCTGGATGCCATCAGCGGGAAGGAGCTCCCATGCCTGGAGGAGCTGGAGAACAACCTGAAGCAGCTGCTGAGCTTCTACCGCTACTCACCGCGCCTCATGTGCGAGCTGCGGTCCACGGCGGCCACCCTTTGTGAGGAGACAGAGTTCCTGGGCGATATCCGGGCAGTGCGGTGGATCATCGGCGAGCAGAACGTCCTCAACGCTCTCATCAAGGACTACCTGGAGGTGGTGGCCCATCTCAAGGAGGTCAGCAGCCAGACCCAGCGGGCAGACGCCTCGGCCATCGCACTGGCCCTGCTGCAGTTCCTCATGGACTACCAGTCCATCAAGCTCATCTACTTCCTGCTGGACGTGATTGCTGTGCTCTCGCGTCTGGCCTACATCTTCCAGGGCGAGTACCTGCTGGTGTCCCAGGTGGATGACAAGATCGAGGAGGCCATCCAGGAGATCAGCCGGCTGGCTGACTCCCCGGGAGAATACCTGCAGGAGTTCGAGGAGAATTTCCGAGAGAGCTTCAACGGGATCGCCATGAAGAACCTCAGGGTGGCTGAAGCCAAGTTCCAGTCCATCAGGGAGAAGATCTGCCAGAAGACCCAGGTCATCCTGGCTCAGAGGTTCGACTCCCGCAGCCGGATCTTTGTGAAGGCCTGCCAGGTGTTTGACCTGGCTGCCTGGCCCAGGAGCAGTGAGGAGCTGATGAGCTATGGCAAGGAGGATATGGTGCAAATATTTGATCACCTGGAGGCCATCCCGACCTTTTCCCGGGATGTCTGTAGGGAAGGGCTGGACCCCCGGGGTAGTCTGTTGATGGAGTGGCGAGAACTCAAGGCTGATTACTACACCAAAAATGGCTTCAAAGACCTGATCAGCCACATTTGCAAGTACAAACAGAGGTTTCCACTCTTGAACAAGATCATCCAGGTTCTTAAAGTCCTCCCCACTTCCACCGCTTGCTGCGAGAAAGGCCGCAATGCCCTCCAGCGAGTTCGCAAAAACCACCGCTCCCGCCTGACCCTGGAGCAGCTTAGCGACCTGTTGACAATCGCTGTAAACGGACCGCCAATCACCAACTTTGATGCCAAGCGAGCCCTGGACAGCTGGTTTGAGGAGAAGTCTGGGAACAGTTACGCGCTGTCTGCAGAAGTCCTCAGTAGGATGTCTGCGCTGGAGCAGAAGCCAGCACTACAGACCATGGACCACGGGACGGAGTTTTACCCCGACATTTAG
Amino sequence
MTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRKVPKYQDDAYSQCATTMTHGVQNIGQTQGEGDWKVPQGVSKEPGQLEDEEEEPSSFKADSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLPPQVLELPEFSDPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLALEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSVILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFSALGIRLQDEKPTVGLGVDGANITASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPCLEELENNLKQLLSFYRYSPRLMCELRSTAATLCEETEFLGDIRAVRWIIGEQNVLNALIKDYLEVVAHLKEVSSQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYIFQGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAMKNLRVAEAKFQSIREKICQKTQVILAQRFDSRSRIFVKACQVFDLAAWPRSSEELMSYGKEDMVQIFDHLEAIPTFSRDVCREGLDPRGSLLMEWRELKADYYTKNGFKDLISHICKYKQRFPLLNKIIQVLKVLPTSTACCEKGRNALQRVRKNHRSRLTLEQLSDLLTIAVNGPPITNFDAKRALDSWFEEKSGNSYALSAEVLSRMSALEQKPALQTMDHGTEFYPDI*