ENST00000534751.3 PRDM11

Information
Transcript ID
ENST00000534751.3
Genome
hg19
Position
chr11:45,168,190-45,236,264
Strand
+
CDS length
1,551
Amino acid length
517
Gene symbol
PRDM11
Gene type
protein-coding
Gene description
PR/SET domain 11
Gene Entrez Gene ID
56981
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,168,190 45,168,428
2 45,203,312 45,203,436
3 45,203,797 45,203,900
4 45,204,412 45,204,674
5 45,226,262 45,226,329
6 45,230,425 45,230,846
7 45,234,020 45,236,264
CDS
Exon number Type Start Stop
2 CDS 45,203,318 45,203,436
3 CDS 45,203,797 45,203,900
4 CDS 45,204,412 45,204,674
5 CDS 45,226,262 45,226,329
6 CDS 45,230,425 45,230,846
7 CDS 45,234,020 45,234,594
Other genome
Genome Chromosome Start End Links
hg38 chr11 45,146,639 45,214,713 Link
CDS sequence
ATGACCGAGAACATGAAGGAGTGCTTGGCCCAGACCAATGCAGCCGTGGGGGATATGGTGACGGTGGTGAAGACGGAGGTCTGCTCACCACTCCGAGACCAGGAGTATGGCCAGCCCTGCTCTAGGAGACCGGACTCCTCGGCCATGGAAGTTGAGCCCAAGAAACTGAAGGGGAAGCGCGACCTCATCGTGCCCAAAAGCTTCCAGCAAGTGGACTTCTGGTTCTGTGAGTCCTGCCAGGAGTACTTCGTGGATGAATGCCCAAACCATGGCCCCCCGGTGTTTGTGTCTGACACACCGGTGCCCGTGGGCATCCCAGACCGGGCGGCGCTCACCATCCCACAGGGCATGGAGGTGGTCAAGGACACTAGTGGAGAGAGTGACGTGCGATGTGTAAACGAGGTCATCCCCAAGGGCCACATCTTCGGCCCCTATGAGGGGCAGATCTCCACCCAGGACAAATCAGCTGGCTTCTTCTCCTGGCTGATTGTGGACAAGAACAACCGCTATAAGTCCATAGATGGCTCAGACGAGACCAAAGCCAACTGGATGAGGAATGTGGCACACCTGGCTGAGCGTAAGAGGAAGCCCAAGTTCTCCAAGGAGGAGCTGGACATTCTTGTCACAGAGGTGACCCACCATGAAGCAGTGCTCTTTGGGAGGGAGACCATGCGGCTGTCCCATGCTGACAGGGACAAGATTTGGGAAGGCATAGCCCGGAAAATCACCTCCGTCAGCCAGGTGCCCCGCTCCGTCAAGGACATTAAGCACAGATGGGATGACATGAAACGGAGGACCAAGGACAAGCTGGCCTTCATGCAGCAGTCCCTGTCGGGCCCTGGGGCCGGGGGCCGGGCCCCCACCATCGTGCTCACGGCCCACGAGAGGGCCATCAAGTCGGCGCTGCTCACGGCCCGTGCAGGGCGCGGCTTCCCCAGGGCGGAACTGGATGGCACCGACAGCCCTTCGACCAGCTATGATGAAGATGAGGAGGCGCCTGGGCCCTCAAGGCAGCCTCTTCGGGTGCCTCTGCAGCGGTCTCCGGAGGAAGAGGCCCACCTGGCCAGGCCCGCCCTGCTCCGTTCATCCTCCTCCTCAGACCAGTCTGAGACGGTGGGCCCCAAGCCAGAGGCCCTGCCCCATCCCTCGCCCCAGGCCCAGGCTGCCTGCAGGACCCCTCGGCCGCACCCCAGCCCACCCACCACGGGCCTTGACTGGCAGCTCCTCCACGTCCATGCCCAGCAGACCGAGGTGTTCCGGCAGTTCTGCCAGGAGCTGGTGACCGTGCACCGGGACATGGCCAACAGCATGCACGTCATCGGCCAGGCCATGGCCGAGCTGACCAGCCGTGTCGGTCAGATGTGCCAGACGCTGACAGAGATCCGGGATGGGGTTCAGGCATCTCAGCGGGGGCCAGAAGGGGCAGACCCTACGGGCTCCACTCCCCAGGCCACCCAGGCCCAAGCCCCCCTGCCAGAGCCCCCACCAGCTTCCCCAGCATCAGCCCCCACACGGACTACCAGGTCTCGGAAGAGAAAGCACAATTTCTAA
Amino sequence
MTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRNVAHLAERKRKPKFSKEELDILVTEVTHHEAVLFGRETMRLSHADRDKIWEGIARKITSVSQVPRSVKDIKHRWDDMKRRTKDKLAFMQQSLSGPGAGGRAPTIVLTAHERAIKSALLTARAGRGFPRAELDGTDSPSTSYDEDEEAPGPSRQPLRVPLQRSPEEEAHLARPALLRSSSSSDQSETVGPKPEALPHPSPQAQAACRTPRPHPSPPTTGLDWQLLHVHAQQTEVFRQFCQELVTVHRDMANSMHVIGQAMAELTSRVGQMCQTLTEIRDGVQASQRGPEGADPTGSTPQATQAQAPLPEPPPASPASAPTRTTRSRKRKHNF*