ENST00000340160.7 TSPAN18
Information
- Transcript ID
- ENST00000340160.7
- Genome
- hg19
- Position
- chr11:44,785,976-44,953,972
- Strand
- +
- CDS length
- 747
- Amino acid length
- 249
- Gene symbol
- TSPAN18
- Gene type
- protein-coding
- Gene description
- tetraspanin 18
- Gene Entrez Gene ID
- 90139
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 44,785,976 | 44,786,062 |
| 2 | 44,881,879 | 44,882,020 |
| 3 | 44,927,958 | 44,928,030 |
| 4 | 44,931,256 | 44,931,450 |
| 5 | 44,939,523 | 44,939,597 |
| 6 | 44,940,765 | 44,940,863 |
| 7 | 44,941,368 | 44,941,550 |
| 8 | 44,948,225 | 44,948,308 |
| 9 | 44,950,682 | 44,953,972 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 44,927,968 | 44,928,030 |
| 4 | CDS | 44,931,256 | 44,931,450 |
| 5 | CDS | 44,939,523 | 44,939,597 |
| 6 | CDS | 44,940,765 | 44,940,863 |
| 7 | CDS | 44,941,368 | 44,941,550 |
| 8 | CDS | 44,948,225 | 44,948,308 |
| 9 | CDS | 44,950,682 | 44,950,729 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 44,764,426 | 44,932,421 | Link |
CDS sequence
ATGGAAGGCGACTGTCTGAGCTGCATGAAGTATCTGATGTTTGTATTCAATTTCTTCATATTTCTGGGCGGGGCCTGCCTGCTGGCCATCGGCATCTGGGTCATGGTGGACCCCACCGGCTTCCGGGAGATCGTGGCTGCCAATCCTCTGCTCCTCACGGGCGCCTACATCCTCCTGGCCATGGGGGGCCTGCTCTTTCTGCTCGGCTTCCTGGGCTGCTGCGGGGCCGTCCGTGAGAACAAGTGTCTGCTGCTATTTTTCTTCCTGTTCATCCTGATCATCTTCCTGGCAGAGCTCTCAGCAGCCATCCTGGCCTTCATCTTCAGGGAAAATCTCACCCGAGAATTCTTCACCAAGGAGCTCACCAAGCACTACCAGGGCAATAACGACACAGACGTCTTCTCTGCCACCTGGAACTCGGTCATGATCACATTTGGTTGCTGCGGGGTCAACGGGCCTGAAGACTTTAAGTTTGCATCTGTGTTTCGACTCCTGACCCTGGATAGTGAAGAGGTGCCGGAGGCCTGCTGCCGGAGGGAACCCCAAAGTCGGGACGGGGTCCTGCTGAGCCGGGAGGAGTGCCTCCTGGGAAGGAGCCTATTCCTAAACAAGCAGGGCTGTTACACGGTGATCCTCAACACCTTCGAGACCTACGTCTACTTGGCCGGAGCCCTTGCCATCGGGGTACTGGCCATCGAGCTTTTCGCCATGATCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAG
Amino sequence
MEGDCLSCMKYLMFVFNFFIFLGGACLLAIGIWVMVDPTGFREIVAANPLLLTGAYILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFRENLTREFFTKELTKHYQGNNDTDVFSATWNSVMITFGCCGVNGPEDFKFASVFRLLTLDSEEVPEACCRREPQSRDGVLLSREECLLGRSLFLNKQGCYTVILNTFETYVYLAGALAIGVLAIELFAMIFAMCLFRGIQ*