ENST00000524555.3 SAA2-SAA4
Information
- Transcript ID
- ENST00000524555.3
- Genome
- hg19
- Position
- chr11:18,252,970-18,270,182
- Strand
- -
- CDS length
- 627
- Amino acid length
- 209
- Gene symbol
- SAA2-SAA4
- Gene type
- protein-coding
- Gene description
- SAA2-SAA4 readthrough
- Gene Entrez Gene ID
- 100528017
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 18,252,970 | 18,253,211 |
| 5 | 18,253,942 | 18,254,080 |
| 4 | 18,257,383 | 18,257,477 |
| 3 | 18,267,457 | 18,267,595 |
| 2 | 18,269,468 | 18,269,562 |
| 1 | 18,270,150 | 18,270,182 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 18,253,049 | 18,253,211 |
| 5 | CDS | 18,253,942 | 18,254,080 |
| 4 | CDS | 18,257,383 | 18,257,477 |
| 3 | CDS | 18,267,457 | 18,267,595 |
| 2 | CDS | 18,269,468 | 18,269,558 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 18,231,423 | 18,248,635 | Link |
CDS sequence
ATGAAGCTTCTCACGGGCCTGGTTTTCTGCTCCTTGGTCCTGAGTGTCAGCAGCCGAAGCTTCTTTTCGTTCCTTGGCGAGGCTTTTGATGGGGCTCGGGACATGTGGAGAGCCTACTCTGACATGAGAGAAGCCAATTACATCGGCTCAGACAAATACTTCCATGCTCGGGGGAACTATGATGCTGCCAAAAGGGGACCTGGGGGTGCCTGGGCTGCAGAAGTGATCAGCACAATGAGGCTTTTCACAGGCATTGTTTTCTGCTCCTTGGTCATGGGAGTCACCAGTGAAAGCTGGCGTTCGTTTTTCAAGGAGGCTCTCCAAGGGGTTGGGGACATGGGCAGAGCCTATTGGGACATAATGATATCCAATCACCAAAATTCAAACAGATATCTCTATGCTCGGGGAAACTATGATGCTGCCCAAAGAGGACCTGGGGGTGTCTGGGCTGCTAAACTCATCAGCCGTTCCAGGGTCTATCTTCAGGGATTAATAGACTGCTATTTATTTGGAAACAGCAGCACTGTATTGGAGGACTCGAAGTCCAACGAGAAAGCTGAGGAATGGGGCCGGAGTGGCAAAGACCCCGACCGCTTCAGACCTGACGGCCTGCCTAAGAAATACTGA
Amino sequence
MKLLTGLVFCSLVLSVSSRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGAWAAEVISTMRLFTGIVFCSLVMGVTSESWRSFFKEALQGVGDMGRAYWDIMISNHQNSNRYLYARGNYDAAQRGPGGVWAAKLISRSRVYLQGLIDCYLFGNSSTVLEDSKSNEKAEEWGRSGKDPDRFRPDGLPKKY*