ENST00000418988.2 PSMA1
Information
- Transcript ID
- ENST00000418988.2
- Genome
- hg19
- Position
- chr11:14,526,610-14,665,163
- Strand
- -
- CDS length
- 810
- Amino acid length
- 270
- Gene symbol
- PSMA1
- Gene type
- protein-coding
- Gene description
- proteasome 20S subunit alpha 1
- Gene Entrez Gene ID
- 5682
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 11 | 14,526,610 | 14,526,794 |
| 10 | 14,529,202 | 14,529,312 |
| 9 | 14,532,418 | 14,532,497 |
| 8 | 14,535,116 | 14,535,245 |
| 7 | 14,535,363 | 14,535,433 |
| 6 | 14,535,949 | 14,536,037 |
| 5 | 14,539,188 | 14,539,291 |
| 4 | 14,539,426 | 14,539,527 |
| 3 | 14,540,543 | 14,540,587 |
| 2 | 14,632,512 | 14,632,697 |
| 1 | 14,665,001 | 14,665,163 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 14,526,738 | 14,526,794 |
| 10 | CDS | 14,529,202 | 14,529,312 |
| 9 | CDS | 14,532,418 | 14,532,497 |
| 8 | CDS | 14,535,116 | 14,535,245 |
| 7 | CDS | 14,535,363 | 14,535,433 |
| 6 | CDS | 14,535,949 | 14,536,037 |
| 5 | CDS | 14,539,188 | 14,539,291 |
| 4 | CDS | 14,539,426 | 14,539,527 |
| 3 | CDS | 14,540,543 | 14,540,587 |
| 2 | CDS | 14,632,512 | 14,632,532 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 14,505,064 | 14,643,617 | Link |
CDS sequence
ATGCAGCTCAGCAAGGTGAAGTTTCGAAATCAGTATGACAATGATGTCACTGTTTGGAGCCCCCAGGGCAGGATTCATCAAATTGAATATGCAATGGAAGCTGTTAAACAAGGTTCAGCCACAGTTGGTCTGAAATCAAAAACTCATGCAGTTTTGGTTGCATTGAAAAGGGCGCAATCAGAGCTTGCAGCTCATCAGAAAAAAATTCTCCATGTTGACAACCATATTGGTATCTCAATTGCGGGGCTTACTGCTGATGCTAGACTGTTATGTAATTTTATGCGTCAGGAGTGTTTGGATTCCAGATTTGTATTCGATAGACCACTGCCTGTGTCTCGTCTTGTATCTCTAATTGGAAGCAAGACCCAGATACCAACACAACGATATGGCCGGAGACCATATGGTGTTGGTCTCCTTATTGCTGGTTATGATGATATGGGCCCTCACATTTTCCAAACCTGTCCATCTGCTAACTATTTTGACTGCAGAGCCATGTCCATTGGAGCCCGTTCCCAATCAGCTCGTACTTACTTGGAGAGACATATGTCTGAATTTATGGAGTGTAATTTAAATGAACTAGTTAAACATGGTCTGCGTGCCTTAAGAGAGACGCTTCCTGCAGAACAGGACCTGACTACAAAGAATGTTTCCATTGGAATTGTTGGTAAAGACTTGGAGTTTACAATCTATGATGATGATGATGTGTCTCCATTCCTGGAAGGTCTTGAAGAAAGACCACAGAGAAAGGCACAGCCTGCTCAACCTGCTGATGAACCTGCAGAAAAGGCTGATGAACCAATGGAACATTAA
Amino sequence
MQLSKVKFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERPQRKAQPAQPADEPAEKADEPMEH*