ENST00000534343.1 RRP8
Information
- Transcript ID
- ENST00000534343.1
- Genome
- hg19
- Position
- chr11:6,621,150-6,624,809
- Strand
- -
- CDS length
- 423
- Amino acid length
- 141
- Gene symbol
- RRP8
- Gene type
- protein-coding
- Gene description
- ribosomal RNA processing 8
- Gene Entrez Gene ID
- 23378
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 6,621,150 | 6,621,495 |
| 3 | 6,621,716 | 6,621,812 |
| 2 | 6,621,899 | 6,622,005 |
| 1 | 6,624,634 | 6,624,809 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 6,621,376 | 6,621,495 |
| 3 | CDS | 6,621,716 | 6,621,812 |
| 2 | CDS | 6,621,899 | 6,622,005 |
| 1 | CDS | 6,624,634 | 6,624,732 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 6,599,920 | 6,603,579 | Link |
CDS sequence
ATGTTCGAAGAGCCTGAGTGGGCCGAGGCGGCCCCAGTAGCCGCGGGCCTTGGGCCCGTAATCTCACGACCTCCGCCTGCGGCCTCCTCGCAAAACAAGGTTCCTCTGGAGGATGAGTCTGTGGATGTGGCTGTGTTTTGCCTTTCACTGATGGGAACCAACATCAGGGACTTCCTAGAGGAGGCAAATAGAGTACTGAAGCCAGGGGGTCTCCTGAAAGTGGCTGAGGTCAGCAGCCGCTTTGAGGATGTTCGAACCTTTCTGCGGGCTGTGACCAAGCTAGGCTTCAAGATTGTCTCCAAGGACCTGACCAACAGCCATTTCTTCTTGTTTGATTTCCAAAAGACTGGGCCCCCTCTGGTAGGGCCCAAGGCTCAGCTTTCAGGCCTGCAGCTTCAGCCATGTCTCTACAAGCGCAGGTGA
Amino sequence
MFEEPEWAEAAPVAAGLGPVISRPPPAASSQNKVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR*