ENST00000423813.6 ARFIP2
Information
- Transcript ID
- ENST00000423813.6
- Genome
- hg19
- Position
- chr11:6,498,044-6,502,664
- Strand
- -
- CDS length
- 912
- Amino acid length
- 304
- Gene symbol
- ARFIP2
- Gene type
- protein-coding
- Gene description
- ADP ribosylation factor interacting protein 2
- Gene Entrez Gene ID
- 23647
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
7 | 6,498,044 | 6,498,498 |
6 | 6,498,948 | 6,499,122 |
5 | 6,499,271 | 6,499,428 |
4 | 6,499,968 | 6,500,189 |
3 | 6,500,370 | 6,500,488 |
2 | 6,501,202 | 6,501,298 |
1 | 6,502,461 | 6,502,664 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
7 | CDS | 6,498,343 | 6,498,498 |
6 | CDS | 6,498,948 | 6,499,122 |
5 | CDS | 6,499,271 | 6,499,428 |
4 | CDS | 6,499,968 | 6,500,189 |
3 | CDS | 6,500,370 | 6,500,488 |
2 | CDS | 6,501,202 | 6,501,283 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr11 | 6,476,814 | 6,481,434 | Link |
CDS sequence
ATGGTGTCAGGACCCAACCTCAATGAAACCAGCATTGTGTCTGGTGGCTATGGGGGCTCTGGTGATGGACTCATCCCCACAGGGTCTGGCCGCCATCCATCTCACAGCACCACTCCTTCTGGCCCTGGAGATGAGGTGGCTCGGGGCATTGCTGGAGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAACACCTATAAGTGCACAAAGCAACTGTTATCAGAACGATTTGGTCGAGGCTCACGGACTGTGGACCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTCTACAGCCTGCTGCAGACCCAGCATGCACTGGGTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAATTTGGCTACAATGCAGAGACACAGAAACTACTATGCAAGAATGGGGAAACGCTGCTAGGAGCCGTGAACTTCTTTGTCTCTAGCATCAACACATTGGTCACCAAGACCATGGAAGACACGCTCATGACTGTGAAACAGTATGAGGCTGCCAGGCTGGAATATGATGCCTACCGAACAGACTTAGAGGAGCTGAGTCTAGGCCCCCGGGATGCAGGGACACGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGGCCCATCGGGACAAGTATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTCAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCACAATGCTGTGTCCGCCTACTTTGCTGGGAACCAGAAACAGCTGGAGCAGACCCTGCAGCAGTTCAACATCAAGCTGCGGCCTCCAGGAGCTGAGAAACCCTCCTGGCTAGAGGAGCAGTGA
Amino sequence
MVSGPNLNETSIVSGGYGGSGDGLIPTGSGRHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ*