ENST00000541687.5 GCFC2
Information
- Transcript ID
- ENST00000541687.5
- Genome
- hg38
- Position
- chr2:75,662,708-75,710,985
- Strand
- -
- CDS length
- 765
- Amino acid length
- 255
- Gene symbol
- GCFC2
- Gene type
- protein-coding
- Gene description
- GC-rich sequence DNA-binding factor 2
- Gene Entrez Gene ID
- 6936
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 16 | 75,662,708 | 75,664,783 |
| 15 | 75,665,929 | 75,666,053 |
| 14 | 75,670,138 | 75,670,284 |
| 13 | 75,671,950 | 75,672,016 |
| 12 | 75,673,444 | 75,673,520 |
| 11 | 75,680,193 | 75,680,314 |
| 10 | 75,687,827 | 75,687,977 |
| 9 | 75,689,026 | 75,689,225 |
| 8 | 75,689,969 | 75,690,081 |
| 7 | 75,690,638 | 75,690,719 |
| 6 | 75,691,977 | 75,692,100 |
| 5 | 75,694,241 | 75,694,427 |
| 4 | 75,701,190 | 75,701,287 |
| 3 | 75,702,199 | 75,702,423 |
| 2 | 75,706,523 | 75,706,651 |
| 1 | 75,710,591 | 75,710,985 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 75,694,380 | 75,694,427 |
| 4 | CDS | 75,701,190 | 75,701,287 |
| 3 | CDS | 75,702,199 | 75,702,423 |
| 2 | CDS | 75,706,523 | 75,706,651 |
| 1 | CDS | 75,710,591 | 75,710,855 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 75,889,834 | 75,938,111 | Link |
CDS sequence
ATGGCTCACAGGCCGAAAAGGACTTTTCGGCAGCGCGCGGCTGATTCCAGCGACAGCGATGGCGCCGAGGAGTCGCCTGCTGAGCCTGGGGCGCCGAGGGAACTTCCGGTCCCGGGTTCTGCGGAGGAAGAGCCGCCCTCTGGAGGAGGCCGCGCGCAGGTGGCGGGACTGCCCCACCGGGTTCGGGGCCCTCGTGGCCGGGGCCGGGTCTGGGCGAGCTCCCGGCGTGCCACCAAAGCGGCTCCCCGCGCGGACGAAGGCTCAGAATCCAGAACCCTTGATGTGTCCACAGATGAAGAGGATAAAATACATCACTCCTCAGAAAGTAAGGATGATCAGGGTTTGTCTTCTGACAGTTCTAGCTCTCTTGGAGAAAAAGAACTTTCATCAACAGTTAAGATCCCAGATGCAGCTTTTATTCAGGCAGCCCGCAGAAAACGTGAATTGGCCAGGGCCCAAGATGACTATATTTCTTTGGATGTACAACATACCTCCTCCATCTCTGGTATGAAGAGAGAGAGCGAAGATGACCCTGAGAGTGAGCCTGATGACCATGAAAAGAGAATACCATTTACTCTAAGACCTCAAACACTTAGACAAAGGATGGCTGAGGAATCAATAAGCAGAAATGAAGAAACAAGTGAAGAAAGTCAGGAAGATGAAAAGCAAGATACTTGGGAACAACAGCAAATGAGGAAAGCAGTTAAAATCATAGAGATTAACATTACTACAGGAAACTCACCGCTCACACCTGAGGGAGTATGA
Amino sequence
MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHRVRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSSSSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEINITTGNSPLTPEGV*