ENST00000507320.5 TRIM6
Information
- Transcript ID
- ENST00000507320.5
- Genome
- hg19
- Position
- chr11:5,617,343-5,632,930
- Strand
- +
- CDS length
- 942
- Amino acid length
- 314
- Gene symbol
- TRIM6
- Gene type
- protein-coding
- Gene description
- tripartite motif containing 6
- Gene Entrez Gene ID
- 117854
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 5,617,343 | 5,617,411 |
| 2 | 5,624,838 | 5,624,965 |
| 3 | 5,625,764 | 5,626,027 |
| 4 | 5,626,567 | 5,626,797 |
| 5 | 5,629,602 | 5,629,624 |
| 6 | 5,631,375 | 5,631,475 |
| 7 | 5,631,765 | 5,631,791 |
| 8 | 5,632,007 | 5,632,930 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 5,626,573 | 5,626,797 |
| 5 | CDS | 5,629,602 | 5,629,624 |
| 6 | CDS | 5,631,375 | 5,631,475 |
| 7 | CDS | 5,631,765 | 5,631,791 |
| 8 | CDS | 5,632,007 | 5,632,572 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 5,596,113 | 5,611,700 | Link |
CDS sequence
ATGGAGCCTGAGAGATGCAGGATCCAGACAGAGTTTAATCAGCTGCGAAATATCCTAGACAGAGTGGAGCAACGGGAGCTGAAAAAGCTGGAACAGGAAGAGAAGAAGGGGCTACGAATTATAGAAGAGGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGAGCTGCTGCAGGATGTGAGTGATGTCACAGAAAGGAGTGAGTTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACAAAGCTGAGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATGCTGCGAGTGTGTAGAGAGCTGACAGATGTCCAAAGCTACTGGGTTGACGTGACCCTGAATCCACACACAGCTAATTTAAATCTTGTCCTGGCTAAAAACCGGAGACAAGTGAGGTTTGTGGGAGCTAAAGTATCTGGACCTTCCTGTCTGGAAAAGCATTATGACTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGGTAAGCATTACTGGGAGGTAGATGTGGCCAAGAAGACTGCCTGGATCCTGGGGGTATGCAGCAATTCACTGGGACCTACATTCTCTTTCAACCATTTTGCTCAAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGAGTGGATACTGGGTGATTGGGTTACAGCATAACCATGAATATAGGGCCTATGAGGATTCTTCCCCTTCCCTGCTTCTCTCCATGACAGTGCCCCCTCGCCGTGTTGGGGTTTTCTTAGATTATGAGGCTGGTACTGTCTCCTTTTATAATGTCACAAACCATGGCTTCCCCATCTACACTTTCTCTAAATATTACTTTCCCACTACTCTTTGTCCATATTTTAATCCTTGCAACTGTGTAATTCCTATGACCCTGCGTCGTCCAAGCTCTTGA
Amino sequence
MEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS*