ENST00000341206.9 LCN6

Information
Transcript ID
ENST00000341206.9
Genome
hg19
Position
chr9:139,638,469-139,642,977
Strand
-
CDS length
492
Amino acid length
164
Gene symbol
LCN6
Gene type
protein-coding
Gene description
lipocalin 6
Gene Entrez Gene ID
158062
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 139,638,469 139,638,594
6 139,638,791 139,638,816
5 139,639,092 139,639,193
4 139,639,622 139,639,732
3 139,640,296 139,640,366
2 139,641,876 139,642,015
1 139,642,846 139,642,977
CDS
Exon number Type Start Stop
5 CDS 139,639,114 139,639,193
4 CDS 139,639,622 139,639,732
3 CDS 139,640,296 139,640,366
2 CDS 139,641,876 139,642,015
1 CDS 139,642,846 139,642,935
Other genome
Genome Chromosome Start End Links
hg38 chr9 136,744,017 136,748,525 Link
CDS sequence
ATGGGCGGCCTGCTGCTGGCTGCTTTTCTGGCTTTGGTCTCGGTGCCCAGGGCCCAGGCCGTGTGGTTGGGAAGACTGGACCCTGAGCAGCTTCTTGGGCCCTGGTACGTGCTTGCGGTGGCCTCCCGGGAAAAGGGCTTTGCCATGGAGAAGGACATGAAGAACGTCGTGGGGGTGGTGGTGACCCTCACTCCAGAAAACAACCTGCGGACGCTGTCCTCTCAGCACGGGCTGGGAGGGTGTGACCAGAGTGTCATGGACCTGATAAAGCGAAACTCCGGATGGGTGTTTGAGAATCCCTCAATAGGCGTGCTGGAGCTCTGGGTGCTGGCCACCAACTTCAGAGACTATGCCATCATCTTCACTCAGCTGGAGTTCGGGGACGAGCCCTTCAACACCGTGGAGCTGTACAGTCTGACGGAGACAGCCAGCCAGGAGGCCATGGGGCTCTTCACCAAGTGGAGCAGGAGCCTGGGCTTCCTGTCACAGTAG
Amino sequence
MGGLLLAAFLALVSVPRAQAVWLGRLDPEQLLGPWYVLAVASREKGFAMEKDMKNVVGVVVTLTPENNLRTLSSQHGLGGCDQSVMDLIKRNSGWVFENPSIGVLELWVLATNFRDYAIIFTQLEFGDEPFNTVELYSLTETASQEAMGLFTKWSRSLGFLSQ*