ENST00000540581.5 CACFD1
Information
- Transcript ID
- ENST00000540581.5
- Genome
- hg19
- Position
- chr9:136,325,087-136,335,909
- Strand
- +
- CDS length
- 702
- Amino acid length
- 234
- Gene symbol
- CACFD1
- Gene type
- protein-coding
- Gene description
- calcium channel flower domain containing 1
- Gene Entrez Gene ID
- 11094
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 136,325,087 | 136,325,309 |
| 2 | 136,328,605 | 136,328,677 |
| 3 | 136,330,444 | 136,330,569 |
| 4 | 136,333,043 | 136,333,150 |
| 5 | 136,333,462 | 136,333,586 |
| 6 | 136,333,685 | 136,335,909 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 136,325,189 | 136,325,309 |
| 2 | CDS | 136,328,605 | 136,328,677 |
| 3 | CDS | 136,330,444 | 136,330,569 |
| 4 | CDS | 136,333,043 | 136,333,150 |
| 5 | CDS | 136,333,462 | 136,333,586 |
| 6 | CDS | 136,333,685 | 136,333,833 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr9 | 133,459,965 | 133,470,787 | Link |
CDS sequence
ATGAGCAGCTCAGGTGGGGCGCCCGGGGCGTCCGCCAGCTCTGCGCCGCCCGCGCAGGAAGAGGGCATGACGTGGTGGTACCGCTGGCTGTGTCGCCTGTCTGGGGTGCTGGGGGCAGTCTCTTGCGCGATCTCTGGCCTCTTCAACTGCATCACCATCCACCCTCTGAACATTGCGGCCGGCGTGTGGATGATCATGAATGCCTTCATCTTGTTGCTGTGTGAGGCGCCCTTCTGCTGCCAGTTCATCGAGTTTGCAAACACAGTGGCGGAGAAGGTGGACCGGCTGCGCTCCTGGCAGAAGGCTGTCTTCTACTGCGGGATGGCGGTCGTTCCCATCGTCATCAGCCTGACCCTGACCACGCTGCTGGGCAACGCCATCGCCTTTGCTACGGGGGTGCTGTACGGACTCTCTGCTCTGGGCAAAAAAGCCCAGACTGAGGCTGGTTCCTTCGCAGCCCAGCATCCCAGGGAGCCTGGGCCATTCTCAGAGGGGACAAGACAGGCCTTTGCCACCCCAGCAGTTGTCTCTGGGGAAATCAGAATGCCTGCAGGGGCGATGCGATCTCCTATGCCAGGATCCAGCAGCAGAGGCAGCAGGCGGATGAGGAGAAGCTCGCGGAGACCCTGGAGGGGGAGCTGTGAAGGGCTGGGCGCCCCTCCCTCCCTGTCCCCTCTTCTGGCTCTGTGTGGGTCCAAGTGA
Amino sequence
MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAAGVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKAQTEAGSFAAQHPREPGPFSEGTRQAFATPAVVSGEIRMPAGAMRSPMPGSSSRGSRRMRRSSRRPWRGSCEGLGAPPSLSPLLALCGSK*