ENST00000676323.1 PRDM12
Information
- Transcript ID
- ENST00000676323.1
- Genome
- hg19
- Position
- chr9:133,539,981-133,558,373
- Strand
- +
- CDS length
- 945
- Amino acid length
- 315
- Gene symbol
- PRDM12
- Gene type
- protein-coding
- Gene description
- PR/SET domain 12
- Gene Entrez Gene ID
- 59335
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 133,539,981 | 133,540,263 |
| 2 | 133,541,995 | 133,542,185 |
| 3 | 133,543,545 | 133,543,700 |
| 4 | 133,553,916 | 133,554,027 |
| 5 | 133,556,635 | 133,556,858 |
| 6 | 133,557,681 | 133,558,373 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 133,540,041 | 133,540,263 |
| 2 | CDS | 133,541,995 | 133,542,185 |
| 3 | CDS | 133,543,545 | 133,543,700 |
| 4 | CDS | 133,553,916 | 133,554,027 |
| 5 | CDS | 133,556,635 | 133,556,858 |
| 6 | CDS | 133,557,681 | 133,557,719 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr9 | 130,664,594 | 130,682,986 | Link |
CDS sequence
ATGATGGGCTCCGTGCTCCCGGCTGAGGCCCTGGTGCTCAAGACCGGGCTGAAGGCGCCGGGACTGGCGCTGGCCGAGGTTATCACCTCCGACATCCTGCACAGCTTCCTGTACGGCCGCTGGCGCAACGTGCTCGGGGAGCAGCTCTTCGAGGACAAGAGCCACCACGCCAGCCCCAAGACAGCCTTCACCGCCGAGGTGCTGGCGCAGTCCTTCTCCGGCGAAGTGCAGAAGCTGTCCAGCCTGGTGCTGCCTGCGGAGGTGATCATCGCTCAGAGCTCCATCCCTGGCGAGGGCCTCGGCATCTTCTCCAAGACGTGGATCAAGGCGGGAACCGAGATGGGCCCCTTCACCGGCCGCGTGATCGCCCCGGAGCACGTGGACATCTGCAAGAACAACAACCTCATGTGGGAGGTGTTCAATGAGGATGGCACGGTGCGCTACTTCATCGATGCCAGCCAGGAGGACCACCGGAGCTGGATGACCTACATCAAGTGTGCACGTAACGAACAGGAGCAGAACCTGGAGGTGGTCCAGATCGGCACCAGCATCTTCTACAAGGCCATTGAGATGATCCCACCTGACCAGGAACTGCTGGTGTGGTACGGAAACTCACACAACACCTTCCTGGGGATCCCAGGTGTGCCCGGGCTAGAGGAGGACCAGAAAAAGAACAAGCATGAGGACTTCCACCCGGCGGACTCGGCGGCTGGCCCCGCGGGCCGCATGCGATGCGTCATCTGCCACCGCGGCTTCAACTCGCGCAGCAACCTGCGCTCGCACATGCGCATCCACACGCTGGACAAGCCCTTCGTGTGCCGCTTCTGCAACCGCCGCTTCAGCCAGTCGTCCACGCTGCGCAACCACGTGCGCCTGCACACGGGCGAGCGCCCCTACAAGTGCCAGGCCAGCTTACCCCCAAACCTGGCTCCTGGGGACGGATGA
Amino sequence
MMGSVLPAEALVLKTGLKAPGLALAEVITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGLEEDQKKNKHEDFHPADSAAGPAGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQASLPPNLAPGDG*