ENST00000288462.4 C9orf43

Information
Transcript ID
ENST00000288462.4
Genome
hg19
Position
chr9:116,173,022-116,191,964
Strand
+
CDS length
1,386
Amino acid length
462
Gene symbol
C9orf43
Gene type
protein-coding
Gene description
chromosome 9 open reading frame 43
Gene Entrez Gene ID
257169
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 116,173,022 116,173,418
2 116,175,725 116,175,924
3 116,176,039 116,176,174
4 116,181,388 116,181,445
5 116,183,383 116,183,483
6 116,184,829 116,184,865
7 116,185,606 116,185,778
8 116,186,446 116,186,596
9 116,187,299 116,187,356
10 116,187,624 116,187,700
11 116,187,923 116,188,010
12 116,190,427 116,190,503
13 116,191,180 116,191,243
14 116,191,452 116,191,964
CDS
Exon number Type Start Stop
2 CDS 116,175,774 116,175,924
3 CDS 116,176,039 116,176,174
4 CDS 116,181,388 116,181,445
5 CDS 116,183,383 116,183,483
6 CDS 116,184,829 116,184,865
7 CDS 116,185,606 116,185,778
8 CDS 116,186,446 116,186,596
9 CDS 116,187,299 116,187,356
10 CDS 116,187,624 116,187,700
11 CDS 116,187,923 116,188,010
12 CDS 116,190,427 116,190,503
13 CDS 116,191,180 116,191,243
14 CDS 116,191,452 116,191,666
Other genome
Genome Chromosome Start End Links
hg38 chr9 113,410,742 113,429,684 Link
CDS sequence
ATGGACTTGCCAGATGAGAGCCAGTGGGACGAAACCACCTGTGGCTTGGCTGTTTGTCAGCACCCACAATGCTGGGCAACTATCCGCCGCATTGAGAGGGGCCATCCTCGAATCCTCGGCTCATCCTGCAAAACTCCCCTGGATGCTGAAGATAAACTCCCAGTGCTCACCGTGGTAGACATCTTAGATTCCGGCTTTGCAGCTCATCATTTACCAGAATGTACCTTTACTAAGGCCCATTCTTTATTGTCTCAGAGTTCAAAGTTTTACTCCAAATTTCATGGCAGGCCTCCGAAGGGTTTACCTGACAAAAGTTTGATCAACTGTACTAACAGACTTCCCAAATTTCCAGTGTTGAATTTGAATGAGACGCAACTTCCCTGCCCTGAAGATGTTAGAAATATGGTTGTATTGTGGATCCCAGAAGAAACAGAGATACATGTGAGCCAGCATGGGAAGAAGAAAAGAAAGAACTCGGCAGTGAAAAGCAAGTCATTTCTGGGTCTCTCTGGAAATCAGTCCGCAGGAACACGAGTAGGAACACCAGGGATGATCGTGCCTCCCCCAACCCCAGTGCAATTGTCTGAACAATTCAGTTCAGATTTCCTACCTCTCTGGGCTCAATCCGAAGCGTTACCTCAGGATCTACTGAAGGAACTTTTGCCAGGTGGAAAGCAAACCATGCTCTGTCCAGAGATGAAGATAAAATTGGCCATGATGAAAAAGAATCTTCCCTTGGAAAAGAACCGACCTGACAGTGTGATTTCTTCTAAGATGTTTCTATCTATACACCGCCTCACCCTGGAAAGACCAGCACTGCGATATCCTGAACGTTTGAAGAAATTACATAACCTGAAGACAGAAGGTTACAGGAAACAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAACAGAAGAAGGTGAAAACACCTATTAAGAAACAGGAGGCTAAAAAGAAAGCCAAGAGTGATCCAGGGATCCAGAGCACTTCACATAAACATCCAGTTACCACCGTTCATGACCGTCTCTATGGTTACAGAACTCTGCCAGGTCAGAACAGTGACATGAAGCAGCAGCAGCAGATGGAAAAAGGAACCACTTCGAAACAGGATTCCACGGAGAGACCAAAGATGAACTACTATGACCATGCGGATTTCCACCACAGTGTAAAAAGTCCTGAATTGTATGAAACAGAACCCACTAACAAGGACATTAGTGCTCCAGTGGACGCTGTGCCAGAAGCCCAGGCTGCCAGGCAAAAGAAGATCTCCTTTAACTTTTCAGAAATTATGGCTAGCACAGGCTGGAACTCTGAGCTCAAACTACTTAGGATTCTTCAGGACACTGATGATGAGGATGAGGAGGACCAGTCCTCTGGGGCAGAGTGA
Amino sequence
MDLPDESQWDETTCGLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDAEDKLPVLTVVDILDSGFAAHHLPECTFTKAHSLLSQSSKFYSKFHGRPPKGLPDKSLINCTNRLPKFPVLNLNETQLPCPEDVRNMVVLWIPEETEIHVSQHGKKKRKNSAVKSKSFLGLSGNQSAGTRVGTPGMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETEPTNKDISAPVDAVPEAQAARQKKISFNFSEIMASTGWNSELKLLRILQDTDDEDEEDQSSGAE*