ENST00000389120.8 RNF20

Information
Transcript ID
ENST00000389120.8
Genome
hg19
Position
chr9:104,296,135-104,325,626
Strand
+
CDS length
2,928
Amino acid length
976
Gene symbol
RNF20
Gene type
protein-coding
Gene description
ring finger protein 20
Gene Entrez Gene ID
56254
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 104,296,135 104,296,196
2 104,297,680 104,297,834
3 104,302,485 104,302,652
4 104,302,772 104,302,919
5 104,303,075 104,303,257
6 104,307,049 104,307,167
7 104,309,102 104,309,248
8 104,309,419 104,309,496
9 104,309,681 104,309,800
10 104,312,888 104,313,067
11 104,313,966 104,314,101
12 104,314,423 104,314,544
13 104,314,665 104,315,035
14 104,316,270 104,316,387
15 104,316,976 104,317,125
16 104,319,666 104,319,878
17 104,323,083 104,323,208
18 104,323,372 104,323,512
19 104,324,192 104,324,293
20 104,324,528 104,325,626
CDS
Exon number Type Start Stop
2 CDS 104,297,706 104,297,834
3 CDS 104,302,485 104,302,652
4 CDS 104,302,772 104,302,919
5 CDS 104,303,075 104,303,257
6 CDS 104,307,049 104,307,167
7 CDS 104,309,102 104,309,248
8 CDS 104,309,419 104,309,496
9 CDS 104,309,681 104,309,800
10 CDS 104,312,888 104,313,067
11 CDS 104,313,966 104,314,101
12 CDS 104,314,423 104,314,544
13 CDS 104,314,665 104,315,035
14 CDS 104,316,270 104,316,387
15 CDS 104,316,976 104,317,125
16 CDS 104,319,666 104,319,878
17 CDS 104,323,083 104,323,208
18 CDS 104,323,372 104,323,512
19 CDS 104,324,192 104,324,293
20 CDS 104,324,528 104,324,704
Other genome
Genome Chromosome Start End Links
hg38 chr9 101,533,853 101,563,344 Link
CDS sequence
ATGTCAGGAATTGGAAATAAAAGAGCAGCTGGAGAACCTGGCACCTCCATGCCTCCTGAGAAGAAGGCAGCTGTTGAAGATTCAGGGACCACAGTGGAAACAATTAAGCTAGGAGGTGTCTCTTCAACGGAGGAACTAGACATTAGAACACTGCAAACCAAAAATCGCAAGCTGGCAGAAATGTTGGATCAGCGGCAGGCCATTGAAGATGAACTTCGTGAGCACATTGAAAAACTGGAACGACGACAGGCCACTGATGATGCCTCACTATTGATTGTCAACCGATACTGGAGTCAGTTTGATGAAAACATCCGTATCATCCTTAAACGTTATGATCTGGAGCAGGGCTTGGGAGACCTACTCACAGAACGAAAAGCCCTTGTTGTGCCTGAACCAGAACCAGACTCTGATAGCAATCAGGAGCGTAAAGATGACCGAGAGAGAGGGGAAGGGCAAGAGCCAGCTTTCTCTTTCCTTGCTACTTTGGCCAGCAGTTCCAGTGAAGAGATGGAGTCTCAGCTGCAGGAACGTGTGGAGTCTTCCCGCCGAGCCGTGTCCCAGATTGTGACTGTTTATGATAAATTGCAAGAAAAAGTGGAGCTCTTATCCCGGAAGCTAAACAGTGGAGATAATCTGATAGTGGAGGAAGCAGTGCAGGAGCTGAACTCTTTCCTCGCACAGGAGAATATGAGGCTACAGGAATTGACAGATCTTCTTCAGGAAAAGCATCGCACCATGTCTCAGGAGTTCTCCAAGTTGCAGAGTAAAGTGGAGACAGCCGAATCACGAGTGTCTGTCCTGGAGTCCATGATTGATGACCTGCAGTGGGATATTGACAAAATTCGAAAGAGGGAACAGCGACTCAACCGACACTTAGCAGAAGTCCTAGAACGGGTGAATTCCAAAGGTTATAAGGTGTATGGAGCGGGGAGCAGTCTGTATGGCGGCACAATCACTATCAATGCTCGGAAGTTTGAGGAAATGAATGCAGAGCTTGAGGAGAACAAAGAGTTGGCTCAGAACCGTCTCTGTGAGCTGGAGAAACTTCGGCAAGACTTTGAGGAGGTCACTACACAAAATGAAAAGCTGAAGGTGGAATTGCGGAGTGCAGTGGAGCAAGTCGTTAAGGAAACTCCAGAATATCGCTGCATGCAGTCACAGTTCTCCGTCTTGTATAATGAGAGCCTACAGTTGAAAGCACACTTGGATGAGGCTCGGACCCTGCTTCATGGCACCAGAGGAACCCACCAGCACCAGGTTGAGCTTATTGAGCGAGATGAGGTTAGTCTTCATAAGAAGCTGAGGACTGAAGTAATTCAGCTAGAAGATACATTGGCCCAGGTCCGCAAGGAGTATGAAATGCTGAGGATAGAATTTGAGCAGACCCTTGCTGCCAATGAACAAGCAGGCCCTATAAACAGGGAGATGCGCCACCTCATCAGTAGCCTCCAGAATCACAATCACCAGCTGAAAGGGGAGGTCCTGAGATATAAGCGGAAATTGAGAGAAGCCCAGTCTGACCTGAACAAGACACGCCTGCGTAGTGGTAGTGCCCTCCTGCAGTCCCAGTCTAGTACTGAGGACCCGAAGGATGAGCCTGCGGAGCTAAAACCAGATTCTGAGGACTTATCCTCCCAGTCCTCAGCTTCAAAGGCATCTCAGGAGGATGCCAATGAAATCAAGTCTAAACGGGATGAAGAAGAACGAGAACGAGAAAGGAGGGAGAAGGAGAGGGAACGAGAAAGAGAACGGGAGAAGGAGAAGGAGAGAGAACGAGAGAAGCAGAAGCTAAAAGAGTCAGAAAAAGAGAGAGATTCTGCTAAGGATAAAGAGAAAGGCAAACATGATGATGGACGGAAAAAGGAAGCAGAAATTATCAAACAATTGAAGATTGAACTCAAGAAGGCACAGGAGAGCCAAAAGGAGATGAAACTATTGCTGGATATGTACCGTTCTGCCCCAAAGGAACAGAGAGACAAAGTTCAGCTGATGGCAGCTGAGAAGAAGTCTAAGGCAGAGTTGGAAGATCTAAGGCAAAGACTCAAGGATCTGGAAGATAAAGAGAAGAAAGAGAACAAGAAAATGGCTGATGAGGATGCCTTGAGGAAGATCCGGGCAGTGGAGGAGCAGATAGAATACCTACAGAAGAAGCTAGCCATGGCCAAGCAGGAAGAAGAAGCACTCCTCTCTGAAATGGATGTCACAGGCCAGGCCTTTGAAGACATGCAGGAGCAAAATATCCGTTTGATGCAGCAATTGCGGGAGAAGGATGATGCAAATTTCAAGCTCATGTCAGAGCGTATCAAGTCCAATCAGATCCATAAGTTGCTTAAAGAAGAGAAGGAGGAGCTGGCAGACCAGGTGTTGACTCTGAAGACTCAGGTTGATGCCCAGCTACAGGTAGTAAGGAAACTGGAAGAGAAGGAGCATCTGTTACAGAGCAACATTGGCACAGGGGAGAAAGAGCTGGGTCTTAGGACCCAAGCCTTAGAGATGAATAAACGCAAGGCAATGGAGGCAGCCCAGCTTGCAGATGACCTCAAAGCACAACTGGAGTTGGCTCAGAAGAAGCTACATGATTTTCAGGATGAGATCGTGGAGAACAGTGTTACCAAAGAAAAGGACATGTTCAATTTCAAACGAGCCCAGGAGGACATCTCTAGACTTCGCAGGAAGCTGGAGACCACAAAGAAACCAGACAATGTACCCAAGTGTGATGAGATTCTGATGGAAGAGATTAAGGATTACAAGGCACGCTTGACCTGTCCGTGCTGTAACATGCGTAAAAAGGATGCTGTTCTTACTAAGTGTTTTCATGTCTTCTGCTTTGAGTGTGTGAAGACACGCTATGACACCCGCCAGCGCAAATGTCCCAAGTGTAATGCTGCTTTTGGTGCCAATGATTTTCATCGCATCTACATTGGTTGA
Amino sequence
MSGIGNKRAAGEPGTSMPPEKKAAVEDSGTTVETIKLGGVSSTEELDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEQGLGDLLTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVESSRRAVSQIVTVYDKLQEKVELLSRKLNSGDNLIVEEAVQELNSFLAQENMRLQELTDLLQEKHRTMSQEFSKLQSKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERVNSKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRLCELEKLRQDFEEVTTQNEKLKVELRSAVEQVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQHQVELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG*