ENST00000399753.2 MSRB1
Information
- Transcript ID
- ENST00000399753.2
- Genome
- hg38
- Position
- chr16:1,939,019-1,943,195
- Strand
- -
- CDS length
- 681
- Amino acid length
- 227
- Gene symbol
- MSRB1
- Gene type
- protein-coding
- Gene description
- methionine sulfoxide reductase B1
- Gene Entrez Gene ID
- 51734
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 3 | 1,939,019 | 1,939,143 |
| 2 | 1,940,778 | 1,941,405 |
| 1 | 1,943,102 | 1,943,195 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 1,940,780 | 1,941,405 |
| 1 | CDS | 1,943,102 | 1,943,156 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr16 | 1,989,020 | 1,993,196 | Link |
CDS sequence
ATGTCGTTCTGCAGCTTCTTCGGGGGCGAGGTTTTCCAGAATCACTTTGAACCTGGCGTTTACGTGTGTGCCAAGTGTGGCTATGAGCTGTTCTCCAGCCGCTCGAAGTATGCACACTCGTCTCCATGGCCGGCGTTCACCGAGACCATTCACGCCGACAGCGTGGCCAAGCGTCCGGAGCACAATAGATCTGAAGCCTTGAAGGTGAGAGGCCACAGGGGTGGGGGAGGGACGGGGGCGGCCAGGGAGAGCAGAGAGCCAGTCCCACCTTCCTCCCTCTGCTTGCCCCACAGCTCCAGGGGCTTAGAGGCGTCTATTCCAGGCCTGTTGCCTCTGCCAGGGAGCTGCCACCCCAGGCTATCGGGAGAGCCTGGCCTTCTGGTGCAAATGTGGGAAACAGGACAGGTTTCCTGTACGGGCTCCAGGACAAAGGTCAACCTCTTATGTCGGCGGTCAGCTTGGGAAATAGGCGTGTGGGAAGAAACACCATCTGCCAGCCCCAGTAAGGGCCTTCACTGTGGCTGTATCATGGCCAGAAGCTCACCCAGCTGCCTTGTGATCTTTCCAGGTGTCCTGTGGCAAGTGTGGCAATGGGTTGGGCCACGAGTTCCTGAACGACGGCCCCAAGCCGGGGCAGTCCCGATTCTGAATATTCAGCAGCTCGCTGAAGTTTGTCCCTAA
Amino sequence
MSFCSFFGGEVFQNHFEPGVYVCAKCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRPEHNRSEALKVRGHRGGGGTGAARESREPVPPSSLCLPHSSRGLEASIPGLLPLPGSCHPRLSGEPGLLVQMWETGQVSCTGSRTKVNLLCRRSAWEIGVWEETPSASPSKGLHCGCIMARSSPSCLVIFPGVLWQVWQWVGPRVPERRPQAGAVPILNIQQLAEVCP*