ENST00000567180.3 SCX
Information
- Transcript ID
- ENST00000567180.3
- Genome
- hg19
- Position
- chr8:145,321,356-145,323,384
- Strand
- +
- CDS length
- 606
- Amino acid length
- 202
- Gene symbol
- SCX
- Gene type
- protein-coding
- Gene description
- scleraxis bHLH transcription factor
- Gene Entrez Gene ID
- 642658
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 145,321,356 | 145,322,083 |
| 2 | 145,323,007 | 145,323,384 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 145,321,517 | 145,322,083 |
| 2 | CDS | 145,323,007 | 145,323,045 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr8 | 144,266,453 | 144,268,481 | Link |
CDS sequence
ATGTCCTTCGCCACGCTGCGCCCGGCGCCGCCGGGCCGCTACCTGTACCCCGAGGTGAGCCCGCTGTCGGAGGACGAGGACCGCGGCAGCGACAGCTCGGGCTCCGACGAGAAACCCTGTCGCGTGCACGCGGCGCGCTGCGGCCTCCAGGGCGCCCGGCGGAGGGCGGGGGGCCGGCGGGCCGGGGGCGGGGGGCCAGGGGGCCGGCCAGGCCGTGAGCCCCGGCAGCGGCACACGGCGAACGCGCGCGAGCGAGACCGCACCAACAGCGTGAACACGGCCTTCACGGCGCTGCGCACGCTGATCCCCACCGAGCCCGCCGACCGCAAGCTCTCCAAGATTGAGACGCTGCGCCTGGCCTCCAGCTACATCTCGCACCTGGGCAACGTGCTGCTGGCGGGCGAGGCCTGCGGCGACGGACAGCCCTGCCACTCCGGGCCCGCCTTCTTCCACGCGGCGCGCGCCGGCAGCCCCCCGCCGCCGCCCCCGCCGCCTCCCGCCCGCGACGGCGAGAACACCCAGCCCAAACAGATCTGCACCTTCTGCCTCAGCAACCAGAGAAAGTTGAGCAAGGACCGCGACAGAAAGACAGCGATTCGCAGTTAG
Amino sequence
MSFATLRPAPPGRYLYPEVSPLSEDEDRGSDSSGSDEKPCRVHAARCGLQGARRRAGGRRAGGGGPGGRPGREPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACGDGQPCHSGPAFFHAARAGSPPPPPPPPPARDGENTQPKQICTFCLSNQRKLSKDRDRKTAIRS*