ENST00000529987.5 CHORDC1
Information
- Transcript ID
- ENST00000529987.5
- Genome
- hg38
- Position
- chr11:90,201,444-90,210,765
- Strand
- -
- CDS length
- 435
- Amino acid length
- 145
- Gene symbol
- CHORDC1
- Gene type
- protein-coding
- Gene description
- cysteine and histidine rich domain containing 1
- Gene Entrez Gene ID
- 26973
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 90,201,444 | 90,202,551 |
| 5 | 90,202,813 | 90,202,875 |
| 4 | 90,203,308 | 90,203,427 |
| 3 | 90,205,460 | 90,205,565 |
| 2 | 90,206,202 | 90,206,272 |
| 1 | 90,210,536 | 90,210,765 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 90,202,405 | 90,202,551 |
| 5 | CDS | 90,202,813 | 90,202,875 |
| 4 | CDS | 90,203,308 | 90,203,427 |
| 3 | CDS | 90,205,460 | 90,205,564 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 89,934,612 | 89,943,933 | Link |
CDS sequence
ATGAAATACTGGAGCTGTTGTAGAAGAAAAACTTCTGATTTTAATACATTCTTAGCCCAAGAGGGCTGTACAAAAGGGAAACACATGTGGACTAAAAAAGATGCTGGGAAAAAAGTTGTTCCATGTAGACATGACTGGCATCAGACTGGAGGTGAAGTTACCATTTCAGTATATGCTAAAAACTCACTTCCAGAACTTAGCCGAGTAGAAGCAAATAGCACATTGTTAAATGTGCATATTGTATTTGAAGGAGAGAAGGAATTTGATCAAAATGTGAAATTATGGGGTGTGATTGATGTAAAGCGAAGTTATGTAACTATGACTGCAACAAAGATTGAAATCACTATGAGAAAAGCTGAACCGATGCAGTGGGCAAGCCTTGAACTGCCTGCAGCTAAAAAGCAGGAAAAACAAAAAGATGCCACAACAGATTGA
Amino sequence
MKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDATTD*