ENST00000437090.6 SFTPC
Information
- Transcript ID
- ENST00000437090.6
- Genome
- hg19
- Position
- chr8:22,019,311-22,021,589
- Strand
- +
- CDS length
- 486
- Amino acid length
- 162
- Gene symbol
- SFTPC
- Gene type
- protein-coding
- Gene description
- surfactant protein C
- Gene Entrez Gene ID
- 6440
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 22,019,311 | 22,019,383 |
| 2 | 22,020,087 | 22,020,245 |
| 3 | 22,020,593 | 22,020,715 |
| 4 | 22,020,949 | 22,021,059 |
| 5 | 22,021,283 | 22,021,589 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 22,019,342 | 22,019,383 |
| 2 | CDS | 22,020,087 | 22,020,245 |
| 3 | CDS | 22,020,593 | 22,020,715 |
| 4 | CDS | 22,020,949 | 22,021,059 |
| 5 | CDS | 22,021,283 | 22,021,333 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr8 | 22,161,798 | 22,164,076 | Link |
CDS sequence
ATGGATGTGGGCAGCAAAGAGGTCCTGATGGAGAGCCCGCCGGACTACTCCGCAGCTCCCCGGGGCCGATTTGGCATTCCCTGCTGCCCAGTGCACCTGAAACGCCTTCTTATCGTGGTGGTGGTGGTGGTCCTCATCGTCGTGGTGATTGTGGGAGCCCTGCTCATGGGTCTCCACATGAGCCAGAAACACACGGAGATGGTTCTGGAGATGAGCATTGGGGCGCCGGAAGCCCAGCAACGCCTGGCCCTGAGTGAGCACCTGGTTACCACTGCCACCTTCTCCATCGGCTCCACTGGCCTCGTGGTGTATGACTACCAGCAGCTGCTGATCGCCTACAAGCCAGCCCCTGGCACCTGCTGCTACATCATGAAGATAGCTCCAGAGAGCATCCCCAGTCTTGAGGCTCTCACTAGAAAAGTCCACAACTTCCAGCACAGCCCCTCTTTACTGATGAGAAAACTGAGGCTCAGAGAGATTGCCTGA
Amino sequence
MDVGSKEVLMESPPDYSAAPRGRFGIPCCPVHLKRLLIVVVVVVLIVVVIVGALLMGLHMSQKHTEMVLEMSIGAPEAQQRLALSEHLVTTATFSIGSTGLVVYDYQQLLIAYKPAPGTCCYIMKIAPESIPSLEALTRKVHNFQHSPSLLMRKLRLREIA*