ENST00000424267.6 LGI3

Information
Transcript ID
ENST00000424267.6
Genome
hg19
Position
chr8:22,004,343-22,014,264
Strand
-
CDS length
1,575
Amino acid length
525
Gene symbol
LGI3
Gene type
protein-coding
Gene description
leucine rich repeat LGI family member 3
Gene Entrez Gene ID
203190
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 22,004,343 22,006,490
6 22,009,002 22,009,166
5 22,009,344 22,009,513
4 22,011,481 22,011,552
3 22,012,073 22,012,144
2 22,012,905 22,012,976
1 22,013,850 22,014,264
CDS
Exon number Type Start Stop
7 CDS 22,005,673 22,006,490
6 CDS 22,009,002 22,009,166
5 CDS 22,009,344 22,009,513
4 CDS 22,011,481 22,011,552
3 CDS 22,012,073 22,012,144
2 CDS 22,012,905 22,012,976
1 CDS 22,013,850 22,014,055
Other genome
Genome Chromosome Start End Links
hg38 chr8 22,146,830 22,156,751 Link
CDS sequence
ATGGCGGGGCTGCGGGCCAGGGGGGGCCCGGGGCCGGGGCTGCTGGCGCTCTCCGCGCTCGGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAGGCCCCCCAAGACGCCCCCCTGCCCGCCCAGCTGCTCTTGCACCAGGGACACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCGGAGGTCATCTCCCTGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAACTCCAACAAGTTTACACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCTGGACATCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGGTTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAGCACAAGGTGCAGGACCTGCCGCTGCGGGAGTTCGATTGCATCACCACAGATTTTGTGTTGTACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCCTTCCTCTACTCCAGTGACCTCTATTTGGCTCTGGCCCAGCCAGGAGTCAGTGCCTGCACCATCCTGAAGTGGGACTATGTTGAGCGGCAGCTTCGAGACTATGATAGAATCCCAGCCCCCTCTGCAGTGCACTGCAAGCCGATGGTGGTGGACAGCCAGCTGTACGTGGTCGTGGCCCAGCTGTTTGGCGGCTCTTACATTTACCACTGGGATCCCAACACCACGCGCTTCACCAGGCTGCAAGACATTGACCCGCAGCGCGTGCGCAAGCCTAACGACCTAGAAGCCTTCCGCATCGACGGTGACTGGTACTTTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCACCAGAATGGCTTCTACTCCCACCAGGCACTGCACCCCTGGCACCGTGACACCGACCTGGAGTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAGTGGAGTCGCACCCAGAAGCAGTTTGTGGCCCAGGGTGAGGTGACCCAGGTGCCTGATGCCCAAGCTGTGAAACACTTTCGTGCCGGCCGCGACAGCTACCTGTGCCTCAGCCGCTACATTGGCGACTCCAAGATCCTGCGCTGGGAGGGTACCCGCTTCTCGGAGGTGCAGGCCCTGCCCTCCCGGGGCTCGCTGGCCCTGCAGCCCTTCCTTGTGGGTGGCCGCCGCTACCTGGCACTGGGCAGTGATTTCTCCTTCACCCAGATCTACCAGTGGGATGAGGGACGACAGAAGTTTGTACGGTTCCAGGAGCTGGCTGTGCAGGCTCCTCGGGCCTTCTGCTACATGCCTGCTGGGGACGCCCAGCTACTCCTGGCCCCCAGCTTCAAGGGACAGACGCTGGTGTATAGACACATTGTGGTGGATCTCAGTGCCTAG
Amino sequence
MAGLRARGGPGPGLLALSALGFCLMLQVSAKRPPKTPPCPPSCSCTRDTAFCVDSKAVPRNLPSEVISLTLVNAAFSEIQDGAFSHLPLLQFLLLNSNKFTLIGDNAFTGLSHLQYLSLANNNLQTLPRDIFRPLDILNDLDLRGNSLNCDCKVKWLVEWLAHTNTTVAPIYCASPPRFQEHKVQDLPLREFDCITTDFVLYQTLAFPAVSAEPFLYSSDLYLALAQPGVSACTILKWDYVERQLRDYDRIPAPSAVHCKPMVVDSQLYVVVAQLFGGSYIYHWDPNTTRFTRLQDIDPQRVRKPNDLEAFRIDGDWYFAVADSSKAGATSLYRWHQNGFYSHQALHPWHRDTDLEFVDGEGKPRLIVSSSSQAPVIYQWSRTQKQFVAQGEVTQVPDAQAVKHFRAGRDSYLCLSRYIGDSKILRWEGTRFSEVQALPSRGSLALQPFLVGGRRYLALGSDFSFTQIYQWDEGRQKFVRFQELAVQAPRAFCYMPAGDAQLLLAPSFKGQTLVYRHIVVDLSA*