ENST00000297819.4 SSMEM1
Information
- Transcript ID
- ENST00000297819.4
- Genome
- hg19
- Position
- chr7:129,847,700-129,856,684
- Strand
- +
- CDS length
- 735
- Amino acid length
- 245
- Gene symbol
- SSMEM1
- Gene type
- protein-coding
- Gene description
- serine rich single-pass membrane protein 1
- Gene Entrez Gene ID
- 136263
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 129,847,700 | 129,847,933 |
| 2 | 129,853,320 | 129,853,374 |
| 3 | 129,855,814 | 129,856,684 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 129,847,751 | 129,847,933 |
| 2 | CDS | 129,853,320 | 129,853,374 |
| 3 | CDS | 129,855,814 | 129,856,310 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr7 | 130,207,860 | 130,216,844 | Link |
CDS sequence
ATGGGAGACCTTTTTTCCTTATTTTGGGAGGTAGATCCTCCCCCAATACCTGTAAATTGTGCCATTCCAAATCAGGATTATGAATGCTGGAAGGATGACTCTTGTGGAACCATAGGGAGCTTCCTGCTTTGGTATTTTGTTATCGTATTTGTCCTGATGTTCTTCTCTAGGGCTTCTGTCTGGATGTCTGAGGATAAAAAGGATGAAGGCAGTGGGACAAGTACTTCAGTAAGGAAAGCAAGCAAAGAGACTTCCTGTAAGCGGCAAAGCAAAGACAGTGCCTGGGATCCCTCACAAACAATGAAGAAACCAAAGCAGAACCAACTTACCCCTGTAACCAACTCAGAAGTGGCTTTGGTCAATGCCTATCCTGAACAAAGACGAGCCAGGCGCCAGTCTCAGTTCAATGAGGTGAACCAGAACCAACATGACAGTGATACTACGGAGTATGGCAGTGAAGAGTCTAACTCAGAAGCCTCCTCGTGGAAGGAGAGTGAAAGTGAACACCACCCATCACCAGACAGTATTAAGAGGAGAAAAATGGCTCAGAGGCAAAGGAATCTGGGAAGTTACCAAATGAGCGAAAGGCACTGCCTCCACTGCAAAGCCTTGAGAACCAACGAATGGTTGGCGCACCATTCCCGACAGAAGCCTTCAGTAACACCGCCAATGAAAAGAGACAGTCAAGAGGAAAGTTCCATATCTGACATTAACAAGAAATTTAGTAAATTTTGA
Amino sequence
MGDLFSLFWEVDPPPIPVNCAIPNQDYECWKDDSCGTIGSFLLWYFVIVFVLMFFSRASVWMSEDKKDEGSGTSTSVRKASKETSCKRQSKDSAWDPSQTMKKPKQNQLTPVTNSEVALVNAYPEQRRARRQSQFNEVNQNQHDSDTTEYGSEESNSEASSWKESESEHHPSPDSIKRRKMAQRQRNLGSYQMSERHCLHCKALRTNEWLAHHSRQKPSVTPPMKRDSQEESSISDINKKFSKF*