ENST00000481503.5 ZC3HC1
Information
- Transcript ID
- ENST00000481503.5
- Genome
- hg19
- Position
- chr7:129,658,166-129,691,229
- Strand
- -
- CDS length
- 1,380
- Amino acid length
- 460
- Gene symbol
- ZC3HC1
- Gene type
- protein-coding
- Gene description
- zinc finger C3HC-type containing 1
- Gene Entrez Gene ID
- 51530
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 10 | 129,658,166 | 129,658,572 |
| 9 | 129,662,159 | 129,662,365 |
| 8 | 129,663,351 | 129,663,563 |
| 7 | 129,664,103 | 129,664,217 |
| 6 | 129,665,998 | 129,666,152 |
| 5 | 129,668,742 | 129,668,869 |
| 4 | 129,679,304 | 129,679,387 |
| 3 | 129,680,791 | 129,680,941 |
| 2 | 129,688,873 | 129,688,984 |
| 1 | 129,691,061 | 129,691,229 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 10 | CDS | 129,658,504 | 129,658,572 |
| 9 | CDS | 129,662,159 | 129,662,365 |
| 8 | CDS | 129,663,351 | 129,663,563 |
| 7 | CDS | 129,664,103 | 129,664,217 |
| 6 | CDS | 129,665,998 | 129,666,152 |
| 5 | CDS | 129,668,742 | 129,668,869 |
| 4 | CDS | 129,679,304 | 129,679,387 |
| 3 | CDS | 129,680,791 | 129,680,941 |
| 2 | CDS | 129,688,873 | 129,688,984 |
| 1 | CDS | 129,691,061 | 129,691,206 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr7 | 130,018,326 | 130,051,389 | Link |
CDS sequence
ATGGCGGCGCCCTGTGAGGGACAAGCGTTTGCCGTAGGGGTTGAAAAGAATTGGGGTGCAGTAGTTCGCTCCCCAGAAGGGACCCCCCAGAAAATCCGGCAGCTGATAGATGAGGGGATTGCCCCGGAAGAGGGAGGCGTGGACGCGAAGGACACGTCTGCCACATCCCAGTCAGTTAATGGATCACCCCAAGCGGAACAACCTTCATTGGAATCTACAAGCAAAGAAGCCTTCTTTAGCAGAGTGGAAACATTTTCTTCTTTGAAATGGGCAGGTAAGCCCTTTGAGCTGTCTCCACTCGTCTGTGCAAAATATGGCTGGGTCACAGTGGAATGTGATATGCTCAAGTGCTCTAGCTGTCAAGCTTTTCTCTGTGCCAGTTTACAACCAGCTTTTGACTTTGACAGATATAAGCAACGATGTGCTGAGCTGAAGAAAGCCTTGTGTACTGCCCATGAGAAGTTCTGTTTCTGGCCAGACAGCCCATCCCCAGACCGATTTGGGATGTTGCCCCTGGATGAGCCTGCTATTCTTGTTAGTGAATTCCTAGATCGTTTTCAAAGCCTTTGTCACTTGGACCTCCAGCTTCCTTCCCTAAGGCCGGAGGACTTGAAAACTATGTGCTTGACAGAAGACAAGATCAGTCTTCTCCTACACTTGCTTGAAGATGAACTTGATCACCGAACTGATGAGAGAAAAACTACAATCAAATTAGGCTCAGACATCCAAGTCCACGTCACTGCCTGTATTCTCTCTGTGTGTGGCTGGGCGTGTAGCTCCCCAATCCCAGGCCTTGAGGGGCGACCAGAGCGCTTACCTCTGGTGCCTGAATCTCCTCGGAGGATGATGACCCGGAGCCAGGATGCCACTTTCTCCCCAGGCTCAGAGCAGGCTGAAAAGAGCCCTGGTCCCATTGTCTCTCGAACTCGGAGCTGGGACTCTTCCAGTCCTGTTGACCGTCCTGAGCCAGAGGCTGCTAGCCCCACCACCAGAACTCGCCCAGTGACCCGAAGCATGGGAACAGGAGACACCCCTGGCCTGGAGGTACCATCTAGCCCTCTGCGGAAAGCCAAGCGAGCTCGCCTCTGCTCCTCCAGCAGTTCGGACACATCTTCCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAGACTGGTGCCCTTGGGTGAATATCACACTTGGCAAAGAAAGCAGGGAGAATGGTGGAACTGAACCAGATGCCAGCGCCCCAGCAGAGCCAGGCTGGAAAGCAGTGCTGACCATCCTCTTGGCGCACAAACAGTCTAGCCAGCCAGCTGAAACGGACTCCATGAGTCTCTCTGAGAAATCAAGGAAAGTATTCCGAATATTTCGGCAGTGGGAATCTCTGTGCTCATGCTGA
Amino sequence
MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKDTSATSQSVNGSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQRCAELKKALCTAHEKFCFWPDSPSPDRFGMLPLDEPAILVSEFLDRFQSLCHLDLQLPSLRPEDLKTMCLTEDKISLLLHLLEDELDHRTDERKTTIKLGSDIQVHVTACILSVCGWACSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQSSQPAETDSMSLSEKSRKVFRIFRQWESLCSC*