ENST00000477515.3 GARIN1A
Information
- Transcript ID
- ENST00000477515.3
- Genome
- hg19
- Position
- chr7:128,312,353-128,323,188
- Strand
- +
- CDS length
- 510
- Amino acid length
- 170
- Gene symbol
- GARIN1A
- Gene type
- protein-coding
- Gene description
- golgi associated RAB2 interactor 1A
- Gene Entrez Gene ID
- 346653
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 128,312,353 | 128,312,604 |
| 2 | 128,315,702 | 128,315,913 |
| 3 | 128,320,085 | 128,320,203 |
| 4 | 128,323,018 | 128,323,188 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 128,312,452 | 128,312,604 |
| 2 | CDS | 128,315,702 | 128,315,913 |
| 3 | CDS | 128,320,085 | 128,320,203 |
| 4 | CDS | 128,323,018 | 128,323,043 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr7 | 128,672,299 | 128,683,134 | Link |
CDS sequence
ATGAGTAAAATCAGGGGCCTCCCACCTGAGGTCAGGGAACCAGGCCCTGGAGTGGAACTTGGGGTGGAAAATGGCCTTCTTTGTCAACTGATTCATTCTCCAGAATTCAATTTGTTCTCCAACTCGGTGGTGTTTGAAAGCAACTTTATCCAGACCCATGTACCTGAGGCTGATTTCCAGGTCACTAAGCCCGGGAACTGGAGAGATGTCTGTGAAGGGTCTGCCACCGTGATCCTCGGGGTCACCTCCTCGGTGCCCTCCCTGCCACTCCCCAATGTCCTCCTGATGGCCAATGTTACCTGGCCCCAGGGTCCATTTACCACCTGGAGCACACCTGGTGACGCCCCAGTCATCAACCTCAGCAGCCTGAAAACAGCCTCCTGTCATCCCCCCAGCCCAGCGAGCCCCTCGTGCTGCTGGCGGCTGAGCAGACCAGTGGCAGTTTCTCACAGCTCTCAGGAAAGCCCCAGCTCACAGCAGACAGGAACAATGACACTGCCATTGAAATAG
Amino sequence
MSKIRGLPPEVREPGPGVELGVENGLLCQLIHSPEFNLFSNSVVFESNFIQTHVPEADFQVTKPGNWRDVCEGSATVILGVTSSVPSLPLPNVLLMANVTWPQGPFTTWSTPGDAPVINLSSLKTASCHPPSPASPSCCWRLSRPVAVSHSSQESPSSQQTGTMTLPLK*