ENST00000535159.5 PRRT4
Information
- Transcript ID
- ENST00000535159.5
- Genome
- hg19
- Position
- chr7:127,990,910-128,001,739
- Strand
- -
- CDS length
- 2,700
- Amino acid length
- 900
- Gene symbol
- PRRT4
- Gene type
- protein-coding
- Gene description
- proline rich transmembrane protein 4
- Gene Entrez Gene ID
- 401399
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 127,990,910 | 127,992,732 |
| 4 | 127,998,735 | 127,998,854 |
| 3 | 127,999,203 | 127,999,307 |
| 2 | 127,999,394 | 128,000,117 |
| 1 | 128,001,615 | 128,001,739 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 127,990,910 | 127,992,732 |
| 4 | CDS | 127,998,735 | 127,998,854 |
| 3 | CDS | 127,999,203 | 127,999,307 |
| 2 | CDS | 127,999,394 | 128,000,045 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr7 | 128,350,856 | 128,361,685 | Link |
CDS sequence
ATGGCCAGGCATGGCTGTCTAGGGCTGGGACTGTTCTGCTGCGTCCTGTTTGCTGCTACTGTGGGCCCCCAGCCCACCCCCTCCATCCCAGGTGCCCCTGCCACCACTTTGACCCCCGTACCTCAAAGTGAGGCCTCTATGCTGTCTCTCAACCTGGGACTTAACTTCAAATTCCATCTTCGGGGACCTGCTGCTGTCTGGGGGAGCCCAGTCACAGAGACCCAGCCACTCTCTCTTGGGCCAGGCCAGGAGCCAGGGGAAGAGGTGGCCAGTGGGCTGAGGACTGACCCCCTTTGGGAATTGCTGGTGGGCTCCTCAGGGAACTCTCTCACTGAGTGGGGCTCCACCGAAGGTGGCTCAAAGCCCCGGGCCTCCTCCCTGCTTCCGGAGTCCACATCCCGGCGCTCTGGGCCCAGCGATGGGCCCACTGCCCCCTATCAGCCCAGGAGGAGCACTGTGACCTGGGACACTGCTCTGATGGTGACAGCACTTCCATCCAGTGCTCCCAGGCCCCACCAGAGCGAGCTGGAGCTGAAGTTTGACATGGCACTGAGAGCAGGTGCAGCCCCCACGCTTGGGCATCGAACGCTGCCCCTGCTGCCCAGCCTGCGGGCCAGCCTGGCAGAGATTGCTGGGCGCCTGGGACCCTTTGGATTCTTTGGCACTACTCTGTCCCCACTCCGGAACTTCTCCGGCCTGAGCCCCCCAGGTGAAACTACATCCACAAGCTCTGCCTCTGGAGTTTCGGGTTCTCTGGGGTTCCTTGGTACCACTCTGTCCCTGCCCCCATACTCCCTGGAGAGGAAGCTCTCCAGCCCAAGTCCTCTGGACCCAGCTGCTTCCCTAAGTTTTGCCTCGATTGCAACAACATCATTAGACCCCACAGTCCCCATCTCTGGCCCAGATGACCTCTCTCCTCCCGCCAGCCTCGGGAACCCTTCGGGGCAGCCAGAGTGTGGGCCAGGGTCCTGCAGCGTGGGAGAATTGCCTGAACGCGAGGGGCAGCCTCCCGAGGCGCCGAGGCCCCTCTTTTTCCTGACCCTGGAGGCCGACTGGGCAGAGGCCAGGGCTCGCTGGGGGCTGGCCTGGGAGGCCCACGTGTACGGGGTAGGCGCGCTCTTCGGCCTGGTTGCCTTGCTGGCGCTGCTGGCTCTGGCCCTCTTGCCCTGGCGGTGCCCGCCCGGCGCCCCCTGCCTGGCGCTGCTGGACCTGCTGCTGCTGTCGGCCGGGACCACGCGGGCCTTCCCGCTCTTCTACGACGCCTATGGGCACAGGGATCGACTGCCCGCGCTCGCCTGGCTGCTGCTGCAGGACCTTCCGCTGCCCTGCTTGGCTGCCGGCCTGGGGCTGGCCTGCCTGCTGCTGGCCCGGCCGCGCCCGCCGCGGTGCCCCACCGGCCTGGCTGCGCTGCTGCTCCTGGGGCTGGGGCTGGCGGCCGCCGCCGCCCTCGGGAGCGCCGCGCATCGCCCGCTGCGGCCCCTGCGGCTCGCCTCGCGCGGGCTGCACGCCTTTCTCGCCGCTTTCCTTTCCGGGCTGCTGCTGGCGCTCTCCTGCTGGGGCGGGCGGCGGCGGCGGGCCGGGGCGCCCCTGGGAGGGTCGGGCTTCAAGGGCGCCACACCCCTGCCGCAGGGGCGCAGCCCCTTCGCCCCTCGGGAGTCCTGGCGGCGCGCGGCGCGCACGGCCCCGGTGGCGGGCACCTTCGGGCTGCTGAGCGGAGCCCTGCAGGGCTATGAGGTGCTGCACGCCCTGGGCTACGGCGGCCAATCCGGCCTGGAAGGGCCCTGGCCCTGGTGGGCCTTCCAGCTAGGCCTGCGCCTGGGCGAGGTGGGCGTCGCGCTCCCGTTGGCGCTGCTGGGCCTCTACCCGGCGCTCTGCAGTCCTCGCGTGCCGCCGCGCTGCTGGGCCAAGCTCTTCCGCTTGTCCCCGGGCCACGCGGCTCCGCTGCTGCCGGGAGGCTGGGTCACTGGGCCCCCAGACAAGGAGCCCCTGGGGAGCGCCATCGCTCGCGGGGACGCGGAGCTGCTGCAGCTGTGCGCGCTGGCAGGGCCAGGCCCAGACCTCCTACTCCAGGGCGGAGGTTGCCGGGGCTTCGAAGGCGCGGCGGCCAACCCGGCCCCGTCCCCGGCTTCCTCTCCCTGCAGCGATTACACCGTGGACTTCCGCCCGCCCTCCCCAATCAACCTGCGACGCAGCATCGAGGAGGCCCTCTGCAGCGAGGCCCTGCTTGCGCCTGGCCTCTTCCAGGGCCCTGCCTTCGAGGACGCTCTGCCTGGGCTCGGACTCTACCGCACCGCCTCGCTGGGGACCGGGGGCAGGGCCAGTGAGAGATCAGGGGAGGCCTCTGGCCCCGCTGCGCCCCCGGAGCTCCCCTCCCCTGGGGCTTGGCCCGCAGGCAGCAGCGTCTCATCTGGCTCGTTCTGCGGACTCTCGCGGGACAGCTCGTCCATGCTGCTGTGTTCCAGCCCCGACAGGCCCCCGCGCTGCCCTCTGGTCTGCGTCCTCAGTCCCCCGCGGCCCTCAGGAAGCAGCCCCAGCCTCCCGGCCTCAGGATCCTACCAGGCCCTGTCCCCACCCTCTCGCGACTCCCCAGAGCCTGCTTCTGAGCTGCAGGCCGAGGAGGCCTTGCTGCAGGAGCAGTTCCTGGACGCCTGCCGACAGATCGACGAGCTGAGCGTGGGCAGCGACACCATAGACCTGTGA
Amino sequence
MARHGCLGLGLFCCVLFAATVGPQPTPSIPGAPATTLTPVPQSEASMLSLNLGLNFKFHLRGPAAVWGSPVTETQPLSLGPGQEPGEEVASGLRTDPLWELLVGSSGNSLTEWGSTEGGSKPRASSLLPESTSRRSGPSDGPTAPYQPRRSTVTWDTALMVTALPSSAPRPHQSELELKFDMALRAGAAPTLGHRTLPLLPSLRASLAEIAGRLGPFGFFGTTLSPLRNFSGLSPPGETTSTSSASGVSGSLGFLGTTLSLPPYSLERKLSSPSPLDPAASLSFASIATTSLDPTVPISGPDDLSPPASLGNPSGQPECGPGSCSVGELPEREGQPPEAPRPLFFLTLEADWAEARARWGLAWEAHVYGVGALFGLVALLALLALALLPWRCPPGAPCLALLDLLLLSAGTTRAFPLFYDAYGHRDRLPALAWLLLQDLPLPCLAAGLGLACLLLARPRPPRCPTGLAALLLLGLGLAAAAALGSAAHRPLRPLRLASRGLHAFLAAFLSGLLLALSCWGGRRRRAGAPLGGSGFKGATPLPQGRSPFAPRESWRRAARTAPVAGTFGLLSGALQGYEVLHALGYGGQSGLEGPWPWWAFQLGLRLGEVGVALPLALLGLYPALCSPRVPPRCWAKLFRLSPGHAAPLLPGGWVTGPPDKEPLGSAIARGDAELLQLCALAGPGPDLLLQGGGCRGFEGAAANPAPSPASSPCSDYTVDFRPPSPINLRRSIEEALCSEALLAPGLFQGPAFEDALPGLGLYRTASLGTGGRASERSGEASGPAAPPELPSPGAWPAGSSVSSGSFCGLSRDSSSMLLCSSPDRPPRCPLVCVLSPPRPSGSSPSLPASGSYQALSPPSRDSPEPASELQAEEALLQEQFLDACRQIDELSVGSDTIDL*