ENST00000513506.6 POLR2J3-UPK3BL2
Information
- Transcript ID
- ENST00000513506.6
- Genome
- hg19
- Position
- chr7:102,180,471-102,213,100
- Strand
- -
- CDS length
- 823
- Amino acid length
- 274.333
- Gene symbol
- POLR2J3-UPK3BL2
- Gene type
- ncRNA
- Gene description
- POLR2J3-UPK3BL2 readthrough
- Gene Entrez Gene ID
- 123258399
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 102,180,471 | 102,180,538 |
| 6 | 102,181,540 | 102,181,750 |
| 5 | 102,181,948 | 102,182,109 |
| 4 | 102,207,029 | 102,207,183 |
| 3 | 102,207,444 | 102,207,530 |
| 2 | 102,210,282 | 102,210,371 |
| 1 | 102,212,919 | 102,213,100 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 102,180,471 | 102,180,538 |
| 6 | CDS | 102,181,540 | 102,181,750 |
| 5 | CDS | 102,181,948 | 102,182,109 |
| 4 | CDS | 102,207,029 | 102,207,183 |
| 3 | CDS | 102,207,444 | 102,207,530 |
| 2 | CDS | 102,210,282 | 102,210,371 |
| 1 | CDS | 102,212,919 | 102,212,968 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr7 | 102,540,024 | 102,572,653 | Link |
CDS sequence
ATGAACGCCCCTCCAGCCTTCGAGTCGTTCTTGCTCTTCGAGGGCGAGAAGATCACCATTAACAAGGACACCAAGGTACCCAATGCCTGTTTATTCACCATCAACAAAGAAGACCACACACTGGGAAACATCATTAAATCACGTGCCTGCTTCCCCTTCGCCTTCTGCCGTGATTGTCAGTTTCCTGAGGCCTCCCCAGCCACGCTTCCTGTACAGCCTGCAGAACTTCTGGCATGGAAAAGCCCCTGTGCAACTGGTAAAGATATCAATAAGCACCAGGAGGTATCTAAATCCACCAGGAGCCATAGGCATCACGTTGACATCCATTTACCAGTCTTCCCTGGCAAGATTCTTCTGAATTGTGCTGCCTTGGCCAAAAGAGCTGCCCCAGAGCACATCAGCTATGTGCCCCAGCTCTCAAACGACACCTTGGCGGGGAGGCTCACCCTGTCCACCTTCACGCTGGAGCAGCCTCTAGGCCAGTTCAGCAGCCACAACATCTCTGACTTGGATACCATCTGGCTGGTGGTGGCCCTCAGCAACGCCACCCAGAGCTTCACGGCCCCACGGACAAACCAGGACATCCCTGCTCCTGCCAACTTCTCCCAGAGGGGCTACTATCTCACACTGAGGGCCAACCGGGTGCTGTACCAGACCAGAGGCCAGCTCCATGTCCTCCGCGTCGGCAATGATACCCACTGCCAACCAACAAAAATTGGCTGCAACCATCCCCTACCAGGACCCGGCCCCTACAGGGTGAAGTTCCTGGTGATGAATGACGAAGGACCCGTGGCTGAAACAAAGTGGTCCAGCGACACTCGCC
Amino sequence
MNAPPAFESFLLFEGEKITINKDTKVPNACLFTINKEDHTLGNIIKSRACFPFAFCRDCQFPEASPATLPVQPAELLAWKSPCATGKDINKHQEVSKSTRSHRHHVDIHLPVFPGKILLNCAALAKRAAPEHISYVPQLSNDTLAGRLTLSTFTLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTLRANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYRVKFLVMNDEGPVAETKWSSDTR