ENST00000409952.3 LSM5

Information
Transcript ID
ENST00000409952.3
Genome
hg19
Position
chr7:32,526,675-32,534,861
Strand
-
CDS length
189
Amino acid length
63
Gene symbol
LSM5
Gene type
protein-coding
Gene description
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
Gene Entrez Gene ID
23658
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 32,526,675 32,526,905
4 32,527,297 32,527,369
3 32,528,237 32,528,264
2 32,528,861 32,528,956
1 32,534,603 32,534,861
CDS
Exon number Type Start Stop
5 CDS 32,526,873 32,526,905
4 CDS 32,527,297 32,527,369
3 CDS 32,528,237 32,528,264
2 CDS 32,528,861 32,528,915
Other genome
Genome Chromosome Start End Links
hg38 chr7 32,487,063 32,495,249 Link
CDS sequence
ATGAAGAGTGATAAGGAAATTGTTGGTACTCTTCTAGGATTTGATGACTTTGTCAATATGGTACTGGAAGATGTCACTGAGTTTGAAATCACACCAGAAGGAAGAAGGATTACTAAATTAGATCAGATTTTGCTAAATGGAAATAATATAACAATGCTGGTTCCTGGAGGAGAAGGACCTGAAGTGTGA
Amino sequence
MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGPEV*