ENST00000452973.6 VTA1

Information
Transcript ID
ENST00000452973.6
Genome
hg19
Position
chr6:142,468,299-142,542,083
Strand
+
CDS length
669
Amino acid length
223
Gene symbol
VTA1
Gene type
protein-coding
Gene description
vesicle trafficking 1
Gene Entrez Gene ID
51534
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 142,468,299 142,468,536
2 142,490,687 142,490,814
3 142,491,483 142,491,558
4 142,510,563 142,510,671
5 142,519,576 142,519,752
6 142,539,635 142,542,083
CDS
Exon number Type Start Stop
1 CDS 142,468,504 142,468,536
2 CDS 142,490,687 142,490,814
3 CDS 142,491,483 142,491,558
4 CDS 142,510,563 142,510,671
5 CDS 142,519,576 142,519,752
6 CDS 142,539,635 142,539,780
Other genome
Genome Chromosome Start End Links
hg38 chr6 142,147,162 142,220,946 Link
CDS sequence
ATGACAAGCGAGACCCTGTGGTGGCTTATTACTCTAAAGAAGCAGTTGGGTGATAATGAAGCTATTACTCAAGAAATAGTGGGCTGTGCCCATTTGGAGAATTATGCTTTGAAAATGTTTTTGTATGCAGACAATGAAGATCGTGCTGGACGATTTCACAAAAACATGATCAAGTCCTTCTATACTGCAAGTCTTTTGATAGATGTCATAACAGTATTTGGAGAACTCACTGATGAAAATGTGAAACACAGGAAGTATGCCAGATGGAAGGCAACATACATCCATAATTGTTTAAAGAATGGGGAGACTCCTCAAGCAGGCCCTGTTGGAATTGAAGAAGATAATGATATTGAAGAAAATGAAGATGCTGGAGCAGCCTCTCTGCCCACTCAGCCAACTCAGCCATCATCATCTTCAACTTATGACCCAAGCAACATGCCATCAGGCAACTATACTGGAATACAGATTCCTCCGGGTGCACACGCTCCAGCTAATACACCAGCAGAAGTGCCTCACAGCACAGGGGATGTTCGTCTAACCCCAGAAGACTTTGCTAGAGCTCAGAAGTACTGCAAATATGCTGGCAGTGCTTTGCAGTATGAAGATGTAAGCACTGCTGTCCAGAATCTACAAAAGGCTCTCAAGTTACTGACGACAGGCAGAGAATGA
Amino sequence
MTSETLWWLITLKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAEVPHSTGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGRE*