ENST00000706657.1 HMGN3
Information
- Transcript ID
- ENST00000706657.1
- Genome
- hg19
- Position
- chr6:79,910,962-79,944,399
- Strand
- -
- CDS length
- 375
- Amino acid length
- 125
- Gene symbol
- HMGN3
- Gene type
- protein-coding
- Gene description
- high mobility group nucleosomal binding domain 3
- Gene Entrez Gene ID
- 9324
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 79,910,962 | 79,911,443 |
| 6 | 79,911,773 | 79,911,872 |
| 5 | 79,911,993 | 79,912,106 |
| 4 | 79,913,297 | 79,913,347 |
| 3 | 79,918,264 | 79,918,293 |
| 2 | 79,924,689 | 79,924,739 |
| 1 | 79,944,263 | 79,944,399 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 79,911,430 | 79,911,443 |
| 6 | CDS | 79,911,773 | 79,911,872 |
| 5 | CDS | 79,911,993 | 79,912,106 |
| 4 | CDS | 79,913,297 | 79,913,347 |
| 3 | CDS | 79,918,264 | 79,918,293 |
| 2 | CDS | 79,924,689 | 79,924,739 |
| 1 | CDS | 79,944,263 | 79,944,277 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr6 | 79,201,245 | 79,234,682 | Link |
CDS sequence
ATGCCGAAGAGAAAGTCTCCAGAGAATACAGAGGGCAAAGATGGATCCAAAGTAACTAAACAGGAGCCCACAAGACGGTCTGCCAGATTGTCAGCGAAACCTGCTCCACCAAAACCTGAACCCAAACCAAGAAAAACATCTGCTAAGAAAGAACCTGGAGCAAAGATTAGCAGAGGTGCTAAAGGGAAGAAGGAGGAAAAGCAGGAAGCTGGAAAGGAAGGTACTGCACCATCTGAAAATGGTGAAACTAAAGCTGAAGAGATCCACATCTCTCGCTCAACTGTTAATGTCTCAACCTCCAGAGGCACCCCACCCAGCACACTGTCAGTAAAGGGGCAGATTGAAACAGTGAGAGTTAAGGGCACAGAAAACTGA
Amino sequence
MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGAKGKKEEKQEAGKEGTAPSENGETKAEEIHISRSTVNVSTSRGTPPSTLSVKGQIETVRVKGTEN*