ENST00000259803.8 GCM1

Information
Transcript ID
ENST00000259803.8
Genome
hg19
Position
chr6:52,991,759-53,013,639
Strand
-
CDS length
1,311
Amino acid length
437
Gene symbol
GCM1
Gene type
protein-coding
Gene description
glial cells missing transcription factor 1
Gene Entrez Gene ID
8521
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 52,991,759 52,993,744
5 52,995,601 52,995,729
4 52,996,805 52,996,917
3 52,998,870 52,999,122
2 53,010,356 53,010,566
1 53,013,552 53,013,639
CDS
Exon number Type Start Stop
6 CDS 52,993,004 52,993,744
5 CDS 52,995,601 52,995,729
4 CDS 52,996,805 52,996,917
3 CDS 52,998,870 52,999,122
2 CDS 53,010,356 53,010,430
Other genome
Genome Chromosome Start End Links
hg38 chr6 53,126,961 53,148,841 Link
CDS sequence
ATGGAACCTGACGACTTTGATTCTGAAGACAAAGAGATATTAAGCTGGGATATTAATGATGTGAAACTGCCACAGAACGTGAAAAAAACCGACTGGTTCCAGGAGTGGCCAGATTCCTATGCCAAACACATCTACAGCTCGGAGGACAAGAATGCGCAGCGGCACCTGAGCAGCTGGGCCATGCGCAATACCAACAACCACAACTCCCGCATCCTCAAGAAGTCCTGCCTGGGTGTGGTGGTGTGCGGCCGCGACTGTCTCGCAGAGGAGGGGCGCAAGATCTACCTGAGACCTGCCATCTGTGACAAGGCCCGGCAGAAGCAGCAGCGGAAACGCTGTCCCAACTGTGACGGGCCTCTGAAGCTCATCCCTTGCCGAGGTCATGGGGGCTTCCCGGTCACCAACTTCTGGAGGCACGACGGACGCTTTATATTTTTCCAGTCAAAGGGAGAGCATGATCATCCAAAACCAGAAACCAAGTTAGAAGCTGAGGCAAGAAGAGCCATGAAGAAAGTGAACACAGCACCTTCCTCCGTCTCATTGAGCCTGAAGGGGAGCACAGAGACCAGGTCTCTTCCAGGTGAAACACAAAGTCAGGGGAGTTTACCTTTAACTTGGTCTTTCCAGGAAGGCGTCCAATTGCCTGGTAGTTACAGTGGACATTTAATAGCTAACACTCCTCAGCAGAACTCACTAAATGATTGCTTTTCCTTCTCCAAGAGTTATGGTCTGGGAGGAATCACAGATCTGACTGACCAGACTTCCACTGTGGACCCCATGAAGCTCTATGAAAAGCGCAAATTGTCCAGTAGCAGAACCTACAGTAGTGGAGACCTGCTTCCTCCTTCTGCCTCCGGAGTCTACTCTGATCATGGCGATCTACAAGCGTGGAGTAAAAATGCTGCTTTGGGGAGAAATCATCTTGCTGACAACTGTTATTCCAATTATCCTTTTCCTCTGACCAGCTGGCCTTGCAGCTTCTCTCCTTCCCAAAACTCTTCAGAACCCTTTTACCAGCAGCTTCCATTGGAGCCACCTGCAGCCAAAACTGGCTGTCCCCCATTATGGCCAAATCCAGCGGGTAATCTTTATGAAGAGAAAGTACATGTGGATTTTAACAGCTACGTCCAGTCTCCTGCATACCATTCACCTCAAGAAGACCCCTTTCTCTTCACCTACGCCTCTCATCCTCATCAGCAATATTCACTGCCAAGCAAGAGCAGCAAATGGGATTTTGAGGAAGAAATGACATACTTGGGTTTGGATCACTGCAACAATGATATGCTTCTGAACCTGTGTCCTTTGAGATGA
Amino sequence
MEPDDFDSEDKEILSWDINDVKLPQNVKKTDWFQEWPDSYAKHIYSSEDKNAQRHLSSWAMRNTNNHNSRILKKSCLGVVVCGRDCLAEEGRKIYLRPAICDKARQKQQRKRCPNCDGPLKLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPKPETKLEAEARRAMKKVNTAPSSVSLSLKGSTETRSLPGETQSQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSKSYGLGGITDLTDQTSTVDPMKLYEKRKLSSSRTYSSGDLLPPSASGVYSDHGDLQAWSKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWPNPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLFTYASHPHQQYSLPSKSSKWDFEEEMTYLGLDHCNNDMLLNLCPLR*