ENST00000372449.6 TJAP1

Information
Transcript ID
ENST00000372449.6
Genome
hg19
Position
chr6:43,445,308-43,474,292
Strand
+
CDS length
1,674
Amino acid length
558
Gene symbol
TJAP1
Gene type
protein-coding
Gene description
tight junction associated protein 1
Gene Entrez Gene ID
93643
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 43,445,308 43,445,366
2 43,445,825 43,445,970
3 43,465,619 43,465,715
4 43,466,716 43,466,838
5 43,468,482 43,468,510
6 43,469,264 43,469,425
7 43,470,021 43,470,087
8 43,470,326 43,470,355
9 43,471,139 43,471,246
10 43,471,361 43,471,444
11 43,472,499 43,474,292
CDS
Exon number Type Start Stop
4 CDS 43,466,740 43,466,838
5 CDS 43,468,482 43,468,510
6 CDS 43,469,264 43,469,425
7 CDS 43,470,021 43,470,087
8 CDS 43,470,326 43,470,355
9 CDS 43,471,139 43,471,246
10 CDS 43,471,361 43,471,444
11 CDS 43,472,499 43,473,593
Other genome
Genome Chromosome Start End Links
hg38 chr6 43,477,570 43,506,554 Link
CDS sequence
ATGACTAGTGCCGCCCCTGCTAAGAAACCCTACCGTAAGGCACCACCAGAGCATCGGGAGCTGCGTTTGGAAATTCCTGGATCCCGGCTTGAGCAGGAGGAACCCCTGACTGATGCAGAAAGGATGAAGCTCTTACAGGAGGAGAATGAAGAGCTTCGCCGGCGCCTGGCCTCCGCCACCAGACGCACTGAGGCCCTGGAACGTGAGCTGGAAATTGGGCAGGACTGCCTGGAGCTGGAGCTGGGCCAGAGCCGCGAGGAGCTGGACAAATTTAAGGATAAGTTCCGCAGGCTGCAGAACAGCTACACGGCTTCCCAGCGGACCAACCAGGAGTTGGAGGACAAGCTGCACACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGCAATCAAGAAGGCTGAGATGGATAGGAAGACGCTGGACTGGGAGATTGTGGAGCTGACCAACAAGCTGCTGGATGCCAAGAACACCATCAACAAGCTGGAAGAGCTCAATGAGCGGTACCGGCTGGACTGCAACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCACTTCCGAAACCACAAGTTTGCCGATCTGCCCTGTGAGCTACAGGACATGGTTCGGAAACATTTGCACAGTGGTCAAGAGGCCGCCAGCCCAGGTCCTGCTCCCAGCCTAGCCCCAGGGGCTGTGGTGCCTACCTCAGTCATTGCCCGAGTGTTAGAGAAGCCGGAGTCTCTACTGCTCAATTCAGCCCAGTCAGGCAGCGCCGGGCGCCCCTTGGCTGAGGATGTCTTTGTGCATGTGGACATGAGTGAGGGTGTCCCAGGTGATCCAGCCAGTCCCCCGGCCCCTGGCAGCCCCACCCCACAACCCAATGGGGAGTGCCACTCTCTGGGTACTGCCAGGGGCTCCCCGGAGGAAGAGCTGCCCCTGCCAGCCTTTGAGAAGCTGAACCCCTACCCAACCCCGTCTCCACCACACCCACTGTATCCTGGCCGCAGGGTAATAGAGTTCTCTGAGGATAAGGTTCGGATCCCCCGCAACAGCCCCCTGCCCAACTGCACTTACGCTACCCGCCAGGCCATTTCCCTGAGCCTGGTAGAGGAGGGGAGTGAGCGGGCCCGCCCCAGCCCAGTGCCCAGCACCCCTGCCTCAGCCCAGGCCTCACCCCACCACCAGCCCAGCCCAGCACCCCTAACACTCAGTGCCCCAGCTAGCTCTGCCAGCTCTGAAGAGGACCTGCTGGTCAGCTGGCAGCGGGCATTTGTGGACCGTACTCCACCACCTGCTGCTGTGGCCCAGCGCACAGCCTTTGGACGCGATGCCCTCCCTGAGCTGCAGCGCCATTTTGCCCATAGCCCCGCTGACAGAGATGAGGTGGTCCAGGCACCTTCTGCCCGACCCGAAGAGAGTGAGCTTTTGCTACCCACAGAACCTGACTCTGGCTTTCCCAGGGAGGAAGAAGAGCTGAACCTGCCTATCAGTCCTGAGGAAGAGCGCCAGAGCCTGCTGCCCATTAACAGGGGCACAGAGGAGGGGCCAGGCACTTCCCACACCGAGGGCAGGGCCTGGCCACTCCCCAGCTCCAGTCGCCCCCAGCGCAGCCCCAAGAGGATGGGGGTTCACCACCTGCACCGCAAGGACAGCCTGACCCAGGCCCAGGAGCAGGGCAACCTGCTCAACTAG
Amino sequence
MTSAAPAKKPYRKAPPEHRELRLEIPGSRLEQEEPLTDAERMKLLQEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQNSYTASQRTNQELEDKLHTLASLSHSWIFAIKKAEMDRKTLDWEIVELTNKLLDAKNTINKLEELNERYRLDCNLAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAPSLAPGAVVPTSVIARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPAPGSPTPQPNGECHSLGTARGSPEEELPLPAFEKLNPYPTPSPPHPLYPGRRVIEFSEDKVRIPRNSPLPNCTYATRQAISLSLVEEGSERARPSPVPSTPASAQASPHHQPSPAPLTLSAPASSASSEEDLLVSWQRAFVDRTPPPAAVAQRTAFGRDALPELQRHFAHSPADRDEVVQAPSARPEESELLLPTEPDSGFPREEEELNLPISPEEERQSLLPINRGTEEGPGTSHTEGRAWPLPSSSRPQRSPKRMGVHHLHRKDSLTQAQEQGNLLN*