ENST00000334475.10 TREM1

Information
Transcript ID
ENST00000334475.10
Genome
hg19
Position
chr6:41,243,359-41,254,420
Strand
-
CDS length
453
Amino acid length
151
Gene symbol
TREM1
Gene type
protein-coding
Gene description
triggering receptor expressed on myeloid cells 1
Gene Entrez Gene ID
54210
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 41,243,359 41,243,968
2 41,250,133 41,250,489
1 41,254,345 41,254,420
CDS
Exon number Type Start Stop
3 CDS 41,243,922 41,243,968
2 CDS 41,250,133 41,250,489
1 CDS 41,254,345 41,254,393
Other genome
Genome Chromosome Start End Links
hg38 chr6 41,275,621 41,286,682 Link
CDS sequence
ATGAGGAAGACCAGGCTCTGGGGGCTGCTGTGGATGCTCTTTGTCTCAGAACTCCGAGCTGCAACTAAATTAACTGAGGAAAAGTATGAACTGAAAGAGGGGCAGACCCTGGATGTGAAATGTGACTACACGCTAGAGAAGTTTGCCAGCAGCCAGAAAGCTTGGCAGATAATAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAAAGAATTCCCATCCAGTCCAAGTGGGGAGGATCATACTAGAAGACTACCATGATCATGGTTTACTGCGCGTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGGACTGTATCAGTGTGTGATCTACCAGCCTCCCAAGGAGCCTCACATGCTGTTCGATCGCATCCGCTTGGTGGTGACCAAGGGGTTCCGGTGTTCAACATTGTCATTCTCCTGGCTGGTGGATTCCTGA
Amino sequence
MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFRCSTLSFSWLVDS*