ENST00000396268.8 CCHCR1

Information
Transcript ID
ENST00000396268.8
Genome
hg19
Position
chr6:31,110,216-31,125,579
Strand
-
CDS length
2,616
Amino acid length
872
Gene symbol
CCHCR1
Gene type
protein-coding
Gene description
coiled-coil alpha-helical rod protein 1
Gene Entrez Gene ID
54535
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
18 31,110,216 31,110,493
17 31,110,740 31,110,911
16 31,111,039 31,111,190
15 31,112,464 31,112,565
14 31,112,662 31,112,850
13 31,112,943 31,113,079
12 31,113,225 31,113,270
11 31,113,473 31,113,585
10 31,116,182 31,116,288
9 31,116,395 31,116,505
8 31,117,843 31,117,992
7 31,118,232 31,118,342
6 31,118,502 31,118,637
5 31,118,736 31,118,899
4 31,122,273 31,122,576
3 31,124,508 31,124,721
2 31,124,800 31,124,866
1 31,125,162 31,125,579
CDS
Exon number Type Start Stop
18 CDS 31,110,369 31,110,493
17 CDS 31,110,740 31,110,911
16 CDS 31,111,039 31,111,190
15 CDS 31,112,464 31,112,565
14 CDS 31,112,662 31,112,850
13 CDS 31,112,943 31,113,079
12 CDS 31,113,225 31,113,270
11 CDS 31,113,473 31,113,585
10 CDS 31,116,182 31,116,288
9 CDS 31,116,395 31,116,505
8 CDS 31,117,843 31,117,992
7 CDS 31,118,232 31,118,342
6 CDS 31,118,502 31,118,637
5 CDS 31,118,736 31,118,899
4 CDS 31,122,273 31,122,576
3 CDS 31,124,508 31,124,721
2 CDS 31,124,800 31,124,866
1 CDS 31,125,162 31,125,377
Other genome
Genome Chromosome Start End Links
hg38 chr6 31,142,439 31,157,802 Link
CDS sequence
ATGTGGCCACATTCAGCTGGGGCCAGGCCTTGGGCCAGCACTTTAACAGGGAAGGACCCAAGAGTCATGGCCTGCTGGTGTCTGGATGGGCTTCCCTCAGGCCTTGCTGAGCCATGGAGAGAACTCTGGAGATGGCGCTCAAGACCCCTGCACTGTGTACCTCCTTTCTCACCTCTGGCCAGGAGCAGCAGGGACCATAGAAACTTAAGGAGGAGGGGGAACATAGATGGCTGGAGACAGAATCTAGAGCCTTCAAATAATGTGGAGATGTTTCCACCTTCAGGTTCCACTGGGCTGATTCCCCCCTCCCACTTTCAAGCTCGGCCCCTTTCAACTCTGCCAAGAATGGCTCCCACCTGGCTCTCAGACATTCCCCTGGTCCAACCCCCAGGCCATCAAGATGTCTCAGAGAGGCGGCTAGACACCCAGAGACCTCAAGTGACCATGTGGGAACGGGATGTTTCCAGTGACAGGCAGGAGCCAGGGCGGAGAGGCAGGTCCTGGGGGCTGGAGGGGTCACAGGCCCTGAGCCAGCAGGCTGAGGTGATCGTTCGGCAGCTGCAAGAGCTGCGGCGGCTGGAGGAGGAGGTCCGGCTCCTGCGGGAGACCTCGCTGCAGCAGAAGATGAGGCTAGAGGCCCAGGCCATGGAGCTAGAGGCTCTGGCACGGGCGGAGAAGGCCGGCCGAGCTGAGGCTGAGGGCCTGCGTGCTGCTTTGGCTGGGGCTGAGGTTGTCCGGAAGAACTTGGAAGAGGGGAGCCAGCGGGAGCTGGAAGAGGTTCAGAGGCTGCACCAAGAGCAGCTGTCCTCTTTGACACAGGCTCACGAGGAGGCTCTTTCCAGTTTGACCAGCAAGGCTGAGGGCTTGGAGAAGTCTCTGAGTAGTCTGGAAACCAGAAGAGCAGGGGAAGCCAAGGAGCTGGCCGAGGCTCAGAGGGAGGCCGAGCTGCTTCGGAAGCAGCTGAGCAAGACCCAGGAAGACTTGGAGGCTCAGGTGACCCTGGTTGAGAATCTAAGAAAATATGTTGGGGAACAAGTGCCTTCTGAGGTCCACAGCCAGACATGGGAACTGGAGCGACAGAAGCTTCTGGAAACCATGCAGCACTTGCAGGAGGACCGGGACAGCCTGCATGCCACCGCGGAGCTGCTGCAGGTGCGGGTGCAGAGCCTCACACACATCCTCGCCCTGCAGGAGGAGGAGCTGACCAGGAAGGTTCAACCTTCAGATTCCCTGGAGCCTGAGTTTACCAGGAAGTGCCAGTCCCTGCTGAACCGCTGGCGGGAGAAGGTGTTTGCCCTCATGGTGCAGCTAAAGGCCCAGGAGCTGGAACACAGTGACTCTGTTAAGCAGCTGAAGGGACAGGTGGCCTCACTCCAGGAAAAAGTGACATCCCAGAGCCAGGAGCAGGCCATCCTGCAGCGATCCCTGCAGGACAAAGCCGCAGAGGTGGAGGTGGAGCGTATGGGTGCCAAGGGCCTGCAGTTGGAGCTGAGCCGTGCTCAGGAGGCCAGGCGTCGGTGGCAGCAGCAGACAGCCTCAGCCGAGGAGCAGCTGAGGCTTGTGGTCAATGCTGTCAGCAGCTCTCAGATCTGGCTCGAGACCACCATGGCTAAGGTGGAAGGGGCTGCCGCCCAGCTTCCCAGCCTCAACAACCGACTCAGCTATGCTGTCCGCAAGGTCCACACCATTCGGGGCCTGATTGCTCGAAAGCTTGCCCTTGCTCAGCTGCGCCAGGAGAGCTGTCCCCTACCACCACCGGTCACAGACGTGAGCCTTGAGTTGCAGCAGTTGCGGGAAGAACGGAACCGCCTGGATGCAGAACTGCAGCTGAGTGCCCGCCTCATCCAGCAGGAGGTGGGCCGGGCTCGGGAGCAAGGGGAGGCAGAGCGGCAGCAGCTGAGCAAGGTGGCCCAGCAGCTGGAGCAGGAGCTGCAGCAGACCCAGGAGTCCCTGGCTAGCTTGGGGCTGCAGCTGGAGGTAGCACGCCAGGGCCAGCAGGAGAGCACAGAGGAGGCTGCCAGTCTGCGGCAGGAGCTGACCCAGCAGCAGGAACTCTACGGGCAAGCCCTGCAAGAAAAGGTGGCTGAAGTGGAAACTCGGCTGCGGGAGCAACTCTCAGACACAGAGAGGAGGCTGAACGAGGCTCGGAGGGAGCATGCCAAGGCCGTGGTCTCCTTACGCCAGATTCAGCGCAGAGCCGCCCAGGAAAAGGAGCGGAGCCAGGAACTCAGGCGTCTGCAGGAGGAGGCCCGGAAGGAGGAGGGGCAGCGACTGGCCCGGCGCTTGCAGGAGCTAGAGAGGGATAAGAACCTCATGCTGGCCACCTTGCAGCAGGAAGGTCTCCTCTCCCGTTACAAGCAGCAGCGACTGTTGACAGTTCTTCCTTCCCTACTGGATAAGAAGAAATCTGTGGTGTCCAGCCCCAGGCCTCCAGAGTGTTCAGCATCTGCACCTGTAGCAGCAGCAGTGCCCACCAGGGAGTCCATAAAAGGGTCCCTCTCTGTCCTGCTCGATGACCTGCAGGACCTGAGTGAAGCCATTTCCAAAGAGGAAGCTGTTTGTCAAGGAGACAACCTTGACAGATGCTCCAGCTCCAATCCCCAGATGAGCAGCTAA
Amino sequence
MWPHSAGARPWASTLTGKDPRVMACWCLDGLPSGLAEPWRELWRWRSRPLHCVPPFSPLARSSRDHRNLRRRGNIDGWRQNLEPSNNVEMFPPSGSTGLIPPSHFQARPLSTLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPGRRGRSWGLEGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLALAQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVVSSPRPPECSASAPVAAAVPTRESIKGSLSVLLDDLQDLSEAISKEEAVCQGDNLDRCSSSNPQMSS*