ENST00000474923.1 GPX6
Information
- Transcript ID
- ENST00000474923.1
- Genome
- hg19
- Position
- chr6:28,471,963-28,483,564
- Strand
- -
- CDS length
- 546
- Amino acid length
- 182
- Gene symbol
- GPX6
- Gene type
- protein-coding
- Gene description
- glutathione peroxidase 6
- Gene Entrez Gene ID
- 257202
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 28,471,963 | 28,472,275 |
| 3 | 28,474,089 | 28,474,206 |
| 2 | 28,478,528 | 28,478,681 |
| 1 | 28,483,434 | 28,483,564 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 28,472,089 | 28,472,275 |
| 3 | CDS | 28,474,089 | 28,474,206 |
| 2 | CDS | 28,478,528 | 28,478,681 |
| 1 | CDS | 28,483,434 | 28,483,520 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr6 | 28,504,186 | 28,515,787 | Link |
CDS sequence
ATGTTCCAGCAGTTCCAGGCCTCCTGTCTTGTCCTGTTTTTCCTGGTTGGCTTTGCTCAGCAGACCCTAAAGCCTCAAAATAGGAAGGTGGATTGCAACAAAGGGGTAACAGGCACCATCTATGAGTATGGAGCCCTCACCCTCAACGGCGAGGAGTACATCCAATTCAAGCAGTTTGCAGGCAAGCACGTCCTGTTTGTCAATGTGGCCGCCTATTGAGGCTTGGCAGCTCAGTATCCTGAACTGAATGCACTACAGGAGGAGCTGAAGAATTTTGGTGTCATTGTGTTGGCCTTTCCCTGCAACCAGTTTGGAAAACAAGAACCAGGAACAAACTCAGAAATACTTCTTGGTCTCAAAACTCCTGCCCTCCGACCTCTGATCTTTTGGGCTCATCAAGCCAACTCTTCTGGGAGCCCATGAAGGTCCATGATATCCGCTGGAACTTTGAGAAATTTCTGGTGGGGCCCGATGGAGTCCCTGTCATGCATTGGTTCCACCAGGCTCCAGTCAGCACAGTCAAGTCAGACATCCTGGAGTACCTAA
Amino sequence
MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAY*GLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLKTPALRPLIFWAHQANSSGSP*RSMISAGTLRNFWWGPMESLSCIGSTRLQSAQSSQTSWST*