ENST00000377294.3 ZKSCAN4

Information
Transcript ID
ENST00000377294.3
Genome
hg19
Position
chr6:28,209,475-28,220,047
Strand
-
CDS length
1,638
Amino acid length
546
Gene symbol
ZKSCAN4
Gene type
protein-coding
Gene description
zinc finger with KRAB and SCAN domains 4
Gene Entrez Gene ID
387032
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 28,209,475 28,213,753
4 28,214,747 28,214,870
3 28,215,845 28,215,927
2 28,217,465 28,217,612
1 28,219,336 28,220,047
CDS
Exon number Type Start Stop
5 CDS 28,212,894 28,213,753
4 CDS 28,214,747 28,214,870
3 CDS 28,215,845 28,215,927
2 CDS 28,217,465 28,217,612
1 CDS 28,219,336 28,219,758
Other genome
Genome Chromosome Start End Links
hg38 chr6 28,241,697 28,252,269 Link
CDS sequence
ATGGCTAGAGAACCGAGAAAAAACGCAGCCCTGGACGCCCAGTCTGCAGAAGACCAGACGGGGCTCCTGACCGTGAAGGTGGAGAAGGAGGAAGCCTCCGCCTTGACGGCGGAGGTGAGAGCACCCTGCAGCCCTGCTCGGGGCCCCGAACGCTCCCGCCAGCGCTTCCGAGGCTTCCGCTACCCGGAGGCTGCGGGCCCCCGCGAGGCGTTGAGCCGGCTCCGAGAACTCTGCGGACAATGGCTGCAGCCTGAGATGCACAGCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGACCATCCTGCCGGGGAATCTGCAGAGCTGGGTGCGGGAGCAGCATCCAGAGAGCGGGGAGGAGGTGGTGGTGCTATTGGAGTATTTGGAGAGGCAGCTGGATGAGCCGGCGCCGCAGGTTCCCGTTGGTGACCAGGGGCAAGAACTGCTCTGTTGCAAGATGGCACTATTGACACAAACTCAAGGGTCTCAAAGTAGCCAGTGCCAGCCAATGAAGGCTCTGTTCAAGCATGAATCTCTGGGATCCCAGCCCTTACACGATAGAGTTCTCCAGGTTCCTGGGCTTGCCCAGGGAGGGTGCTGCAGAGAAGATGCAATGGTAGCTTCCAGGCTCACTCCAGGGTCCCAGGGTTTGCTGAAAATGGAAGATGTGGCCCTGACCCTCACTCCTGGGTGGACACAGCTGGATTCATCTCAGGTGAACCTCTACAGAGATGAAAAGCAGGAGAACCATAGCAGCCTGGTCTCCCTTGGTGGTGAAATACAGACTAAGAGCAGGGACTTGCCTCCAGTCAAGAAGCTTCCAGAAAAGGAGCATGGGAAGATATGCCACCTGAGGGAAGACATTGCCCAGATTCCTACACATGCAGAAGCTGGTGAACAGGAGGGCAGGTTACAAAGAAAGCAGAAAAATGCCATAGGGAGTAGGCGACATTATTGCCATGAATGTGGAAAGAGTTTTGCTCAAAGTTCAGGCCTGACTAAACACAGGAGAATCCACACTGGTGAGAAACCCTATGAATGTGAAGACTGTGGAAAGACCTTCATTGGGAGCTCTGCCCTTGTCATTCATCAGAGAGTCCACACTGGTGAGAAGCCATATGAGTGTGAAGAATGTGGTAAGGTCTTCAGTCACAGCTCAAACCTTATCAAACACCAGAGAACCCACACTGGGGAGAAGCCCTATGAGTGTGATGACTGTGGGAAGACCTTCAGCCAGAGCTGCAGCCTCCTTGAACATCACAAAATTCATACTGGGGAGAAGCCATACCAGTGCAATATGTGTGGCAAAGCCTTTAGGCGGAATTCACATCTCCTGAGACATCAGAGGATTCATGGTGATAAAAATGTTCAGAATCCTGAGCACGGGGAGTCCTGGGAAAGTCAGGGTAGGACGGAAAGCCAGTGGGAAAATACTGAGGCTCCCGTGTCTTATAAATGTAATGAGTGTGAGAGAAGTTTCACACGGAATAGAAGTCTTATTGAACATCAGAAAATCCACACTGGTGAGAAACCCTATCAGTGTGACACATGTGGAAAAGGTTTCACTCGAACTTCATACCTTGTTCAACATCAGAGAAGCCATGTAGGGAAAAAAACTCTTTCACAGTGA
Amino sequence
MAREPRKNAALDAQSAEDQTGLLTVKVEKEEASALTAEVRAPCSPARGPERSRQRFRGFRYPEAAGPREALSRLRELCGQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEPAPQVPVGDQGQELLCCKMALLTQTQGSQSSQCQPMKALFKHESLGSQPLHDRVLQVPGLAQGGCCREDAMVASRLTPGSQGLLKMEDVALTLTPGWTQLDSSQVNLYRDEKQENHSSLVSLGGEIQTKSRDLPPVKKLPEKEHGKICHLREDIAQIPTHAEAGEQEGRLQRKQKNAIGSRRHYCHECGKSFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIHGDKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNRSLIEHQKIHTGEKPYQCDTCGKGFTRTSYLVQHQRSHVGKKTLSQ*