ENST00000340487.5 ZSCAN16

Information
Transcript ID
ENST00000340487.5
Genome
hg19
Position
chr6:28,092,387-28,097,860
Strand
+
CDS length
1,047
Amino acid length
349
Gene symbol
ZSCAN16
Gene type
protein-coding
Gene description
zinc finger and SCAN domain containing 16
Gene Entrez Gene ID
80345
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 28,092,387 28,092,455
2 28,093,191 28,093,608
3 28,094,561 28,094,699
4 28,097,208 28,097,860
CDS
Exon number Type Start Stop
2 CDS 28,093,222 28,093,608
3 CDS 28,094,561 28,094,699
4 CDS 28,097,208 28,097,728
Other genome
Genome Chromosome Start End Links
hg38 chr6 28,124,609 28,130,082 Link
CDS sequence
ATGACCACAGCCCTGGAACCTGAGGACCAAAAAGGACTTCTGATAATTAAGGCAGAGGACCATTACTGGGGACAGGATTCCAGCTCACAAAAGTGCAGTCCTCACAGGAGGGAACTCTATAGACAACACTTCAGGAAGCTCTGCTATCAGGATGCACCTGGACCCCGTGAAGCTCTTACCCAGCTGTGGGAGCTCTGCCGTCAGTGGCTGAGGCCAGAATGCCACACCAAGGAGCAGATTTTAGACCTGCTGGTGCTAGAACAGTTCCTGAGCATTCTTCCTAAAGACCTGCAAGCATGGGTGCGTGCACACCATCCAGAGACTGGAGAGGAGGCAGTGACGGTACTGGAGGATCTGGAGAGAGAGCTTGATGAACCTGGAAAGCAGGTCCCAGGCAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCCTTGGGAAGGCCATATGAATCACTGACTGTCCAGCTCCATCCCAAAAAGACCCAGCTGGAGCAGGAAGCTGGGAAACCACAAAGGAATGGTGATAAAACTAGGACTAAGAATGAAGAGTTGTTCCAGAAGGAAGATATGCCCAAAGACAAGGAATTCCTTGGGGAGATAAATGACAGACTGAACAAAGATACTCCTCAGCATCCTAAGTCCAAAGATATTATTGAAAATGAGGGCAGATCAGAATGGCAACAGAGGGAAAGAAGACGATATAAATGTGATGAATGTGGGAAAAGTTTCAGTCATAGCTCAGACCTTAGTAAACACAGGAGAACTCACACGGGAGAGAAGCCCTATAAATGTGATGAGTGTGGAAAAGCCTTCATTCAGCGCTCACATCTCATTGGACATCATAGAGTACACACGGGAGTAAAACCCTATAAATGTAAAGAATGTGGGAAAGACTTCAGTGGGCGCACAGGTCTTATTCAGCATCAGAGAATCCACACAGGTGAAAAACCCTATGAATGTGATGAGTGTGGAAGGCCTTTCCGAGTAAGTTCAGCTCTTATTAGACATCAAAGAATTCATACCGCAAATAAACTCTACTAA
Amino sequence
MTTALEPEDQKGLLIIKAEDHYWGQDSSSQKCSPHRRELYRQHFRKLCYQDAPGPREALTQLWELCRQWLRPECHTKEQILDLLVLEQFLSILPKDLQAWVRAHHPETGEEAVTVLEDLERELDEPGKQVPGNSERRDILMDKLAPLGRPYESLTVQLHPKKTQLEQEAGKPQRNGDKTRTKNEELFQKEDMPKDKEFLGEINDRLNKDTPQHPKSKDIIENEGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGVKPYKCKECGKDFSGRTGLIQHQRIHTGEKPYECDECGRPFRVSSALIRHQRIHTANKLY*