ENST00000573600.5 CTDNEP1
Information
- Transcript ID
- ENST00000573600.5
- Genome
- hg38
- Position
- chr17:7,243,618-7,252,081
- Strand
- -
- CDS length
- 735
- Amino acid length
- 245
- Gene symbol
- CTDNEP1
- Gene type
- protein-coding
- Gene description
- CTD nuclear envelope phosphatase 1
- Gene Entrez Gene ID
- 23399
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 7,243,618 | 7,244,245 |
| 8 | 7,244,551 | 7,244,635 |
| 7 | 7,246,026 | 7,246,137 |
| 6 | 7,246,254 | 7,246,370 |
| 5 | 7,246,791 | 7,246,862 |
| 4 | 7,247,064 | 7,247,182 |
| 3 | 7,247,277 | 7,247,343 |
| 2 | 7,251,195 | 7,251,601 |
| 1 | 7,251,965 | 7,252,081 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 9 | CDS | 7,244,185 | 7,244,245 |
| 8 | CDS | 7,244,551 | 7,244,635 |
| 7 | CDS | 7,246,026 | 7,246,137 |
| 6 | CDS | 7,246,254 | 7,246,370 |
| 5 | CDS | 7,246,791 | 7,246,862 |
| 4 | CDS | 7,247,064 | 7,247,182 |
| 3 | CDS | 7,247,277 | 7,247,343 |
| 2 | CDS | 7,251,195 | 7,251,296 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 7,146,937 | 7,155,400 | Link |
CDS sequence
ATGATGCGGACGCAGTGTCTGCTGGGGCTGCGCACGTTCGTGGCCTTCGCCGCCAAGCTCTGGAGCTTCTTCATTTACCTTCTGCGGAGGCAGATCCGCACGGTAATTCAGTACCAAACTGTTCGATATGATATCCTCCCCTTATCTCCTGTGTCCCGGAATCGGCTAGCCCAGGTGAAGAGGAAGATCCTGGTGCTGGATCTGGATGAGACACTTATTCACTCCCACCATGATGGGGTCCTGAGGCCCACAGTCCGGCCTGGTACGCCTCCTGACTTCATCCTCAAGGTGGTAATAGACAAACATCCTGTCCGGTTTTTTGTACATAAGAGGCCCCATGTGGATTTCTTCCTGGAAGTGGTGAGCCAGTGGTACGAGCTGGTGGTGTTTACAGCAAGCATGGAGATCTATGGCTCTGCTGTGGCAGATAAACTGGACAATAGCAGAAGCATTCTTAAGAGGAGATATTACAGACAGCACTGCACTTTGGAGTTGGGCAGCTACATCAAGGACCTCTCTGTGGTCCACAGTGACCTCTCCAGCATTGTGATCCTGGATAACTCCCCAGGGGCTTACAGGAGCCATCCAGACAATGCCATCCCCATCAAATCCTGGTTCAGTGACCCCAGCGACACAGCCCTTCTCAACCTGCTCCCAATGCTGGATGCCCTCAGGTTCACCGCTGATGTTCGTTCCGTGCTGAGCCGAAACCTTCACCAACATCGGCTCTGGTGA
Amino sequence
MMRTQCLLGLRTFVAFAAKLWSFFIYLLRRQIRTVIQYQTVRYDILPLSPVSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQHRLW*