ENST00000508629.5 GIN1
Information
- Transcript ID
- ENST00000508629.5
- Genome
- hg19
- Position
- chr5:102,423,517-102,455,801
- Strand
- -
- CDS length
- 669
- Amino acid length
- 223
- Gene symbol
- GIN1
- Gene type
- protein-coding
- Gene description
- gypsy retrotransposon integrase 1
- Gene Entrez Gene ID
- 54826
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 102,423,517 | 102,423,876 |
| 4 | 102,440,245 | 102,440,550 |
| 3 | 102,442,420 | 102,442,613 |
| 2 | 102,444,273 | 102,444,418 |
| 1 | 102,455,768 | 102,455,801 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 102,423,847 | 102,423,876 |
| 4 | CDS | 102,440,245 | 102,440,550 |
| 3 | CDS | 102,442,420 | 102,442,613 |
| 2 | CDS | 102,444,273 | 102,444,411 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr5 | 103,087,813 | 103,120,097 | Link |
CDS sequence
ATGGTCCGTAGTGGAAAAAATGGTGACCTTCATCTTAAACAGATTGCATATTACAAACGAACTGGTGAATATCATTCAACTACACTGCCAAGTGAGAGAAGTGGCATAAGAAGAGCAGCAAAAAAATTTGTCTTCAAAGAAAAAAAGCTGTTTTATGTTGGAAAAGACAGAAAACAAAATCGTTTGGTAATTGTTTCAGAAGAGGAAAAAAAGAAAGTCTTAAGAGAATGCCATGAAAATGACAGTGGAGCTCATCATGGTATATCCAGGACCCTCACTCTGGTAGAATCCAATTATTATTGGACATCTGTGACCAATGATGTCAAACAGTGGGTATATGCTTGTCAGCATTGCCAAGTGGCAAAAAATACAGTTATTGTAGCACCGAAACAGCACCTTCTCAAGGTGGAAAATCCATGGAGTTTAGTTACTGTTGATCTGATGGGGCCTTTTCATACAAGCAACAGAAGTCATGTATATGCTATAATCATGACAGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATCAGAAGTTTCTAAAGCTATTATCAATATATTTTTCTTATATGGACCTCCTCAGAAAATAATAATGGACCAAAGAGATGAATTCATTCAACAGAAAGTCTTTATCTCTTGCAAGGTTCAGTAG
Amino sequence
MVRSGKNGDLHLKQIAYYKRTGEYHSTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPKQHLLKVENPWSLVTVDLMGPFHTSNRSHVYAIIMTDLFTKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDEFIQQKVFISCKVQ*