ENST00000296733.5 CDC20B

Information
Transcript ID
ENST00000296733.5
Genome
hg19
Position
chr5:54,408,823-54,469,003
Strand
-
CDS length
1,548
Amino acid length
516
Gene symbol
CDC20B
Gene type
protein-coding
Gene description
cell division cycle 20B
Gene Entrez Gene ID
166979
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 54,408,823 54,410,146
11 54,415,641 54,415,746
10 54,416,253 54,416,378
9 54,420,631 54,420,856
8 54,423,085 54,423,179
7 54,424,249 54,424,445
6 54,429,240 54,429,356
5 54,436,142 54,436,235
4 54,439,341 54,439,471
3 54,442,456 54,442,684
2 54,468,416 54,468,478
1 54,468,766 54,469,003
CDS
Exon number Type Start Stop
12 CDS 54,410,046 54,410,146
11 CDS 54,415,641 54,415,746
10 CDS 54,416,253 54,416,378
9 CDS 54,420,631 54,420,856
8 CDS 54,423,085 54,423,179
7 CDS 54,424,249 54,424,445
6 CDS 54,429,240 54,429,356
5 CDS 54,436,142 54,436,235
4 CDS 54,439,341 54,439,471
3 CDS 54,442,456 54,442,684
2 CDS 54,468,416 54,468,478
1 CDS 54,468,766 54,468,828
Other genome
Genome Chromosome Start End Links
hg38 chr5 55,112,995 55,173,175 Link
CDS sequence
ATGGAGTGGAAACTGGAGCGCACCGCGCCTCGGAGGGTCCGCACGGAAGAGGAGATGCTGTGGGAAAGTATCATGCGTGTGCTCTCCAAAGACTTGAAGCAGAAGAGAAGTCAAGATTCCGCCAACGTACTCGATTCAGTTAATGCTACGTATTCTGACTTTAAGAGCAACTTTGCGAAGAGGCTGTCCGCAGAGGTTCCTGTTGCGAGTAGCCCCATTACCACAAGGTGGCAGCAAAGTCAAACTAGGGCTCTGTCCTCTGATTCCTTTGGGGAAGAGCAGTCAACCACCTACCTCCCAGAAGCTTCCGGATCAGTGCTGAAGACACCGCCTGAGAAAGAGACCTTGACTCTAGGATCCCGCAAAGAACAACTGAAGACCCCCAGCAAAGGAATTTCTGAAACAAGTAACTCTGCTCTCCATTTTTGCAAGGCACCTCATGCAATGGACAGAGACTGGAAAGAAAGTGTTGCCTCAAAAGGGCAGAAATGCCTAAAACAACTCTTTGTAACCCAGAACGTGGTTCAGCAGGCTAATGGAAAAATGCAGCTCTGTGAGCAATCCGAATGTGTTTGGAAAGGCTGCAAAGATGGAGTCAGAGATGAATCCTTCCATCTTAAAAGTTCTGGTGATATAAACGATTCCATACTCCAACCAGAGGTGAAGATTCATATTACTGGTCTTCGAAATGACTACTATCTGAATATCCTAGATTGGAGTTTTCAGAATCTTGTTGCCATAGCCCTGGGCTCTGCTGTATACATCTGGAATGGGGAGAACCACAATGGGATTGAAAACATAGACTTAAGTCTCACTTGTAACTATATCTCTTCTGTGTCCTGGATAAAAGAGGGAACTTGCCTGGCAGTTGGCACCAGCGAGGGAGAAGTGCAATTATGGGATGTGGTAACTAAAAAGCGGCTGAGAAATATGCTTGGTCATTTGTCAGTAGTTGGGGCTCTGAGCTGGAATCACTTTATCCTCAGCAGTGGGTCAAGACTGGGGCGTGTTTATCATCACGATGTTCGGGTAGCCCAGCATCATGTTGGAACACTTCGCCACAAGCAAGCTGTGTGTGCTCTGAAGTGGTCACCGGATGGCAGGCTGCTTTCCAGCGGCTGCAGTGATGGACTGCTGACAATATGGCCCCACGATCCAGGTGCCAGTGCACAGGGCCAACCGCTGAAAGTCATAACCCAGTCTACGGCAGTCAAGGCCATGGATTGGTGTCCCTGGCAGTCTGGGGTCCTTGCCATTGGAGGAGGAATGAAGGATGGACGCTTACACATCTTGGATATAAATGCTGGGAAGAGCATCCAGACCCCAAGCACAAACTCACAGATTTGTTCCTTAATCTGGCTACCTAAGACAAAGGAGATTGCAACTGGTCAAGGTACTCCCAAGAATGATGTGACTGTGTGGACCTGTCCCACTGTGTCCAGGTCAGGCCACAGGGGCAGAGTGCTGCACCTGTCTTTGAGTCCAGACCAGACCCGGGTGTTTTCTGCTGCAGCTGATGGGACGGCCTCTGTATGGAATTGCTACTAG
Amino sequence
MEWKLERTAPRRVRTEEEMLWESIMRVLSKDLKQKRSQDSANVLDSVNATYSDFKSNFAKRLSAEVPVASSPITTRWQQSQTRALSSDSFGEEQSTTYLPEASGSVLKTPPEKETLTLGSRKEQLKTPSKGISETSNSALHFCKAPHAMDRDWKESVASKGQKCLKQLFVTQNVVQQANGKMQLCEQSECVWKGCKDGVRDESFHLKSSGDINDSILQPEVKIHITGLRNDYYLNILDWSFQNLVAIALGSAVYIWNGENHNGIENIDLSLTCNYISSVSWIKEGTCLAVGTSEGEVQLWDVVTKKRLRNMLGHLSVVGALSWNHFILSSGSRLGRVYHHDVRVAQHHVGTLRHKQAVCALKWSPDGRLLSSGCSDGLLTIWPHDPGASAQGQPLKVITQSTAVKAMDWCPWQSGVLAIGGGMKDGRLHILDINAGKSIQTPSTNSQICSLIWLPKTKEIATGQGTPKNDVTVWTCPTVSRSGHRGRVLHLSLSPDQTRVFSAAADGTASVWNCY*