ENST00000679015.1 SKP2
Information
- Transcript ID
- ENST00000679015.1
- Genome
- hg19
- Position
- chr5:36,152,205-36,182,632
- Strand
- +
- CDS length
- 312
- Amino acid length
- 104
- Gene symbol
- SKP2
- Gene type
- protein-coding
- Gene description
- S-phase kinase associated protein 2
- Gene Entrez Gene ID
- 6502
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 36,152,205 | 36,152,372 |
2 | 36,177,067 | 36,177,118 |
3 | 36,177,287 | 36,177,394 |
4 | 36,181,920 | 36,182,632 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
3 | CDS | 36,177,297 | 36,177,394 |
4 | CDS | 36,181,920 | 36,182,133 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr5 | 36,152,103 | 36,182,530 | Link |
CDS sequence
ATGCTAAAGAATGACTGCTTTCAGGAATTTTTCCAGCTCAACTACCTCCAACACCTATCACTCAGTCGGTGCTATGATATAATACCTGAAACTTTACTTGAACTTGGAGAAATTCCCACACTAAAAACACTACAAGTTTTTGGAATCGTGCCAGATGGTACCCTTCAACTGTTAAAGGAAGCCCTTCCTCATCTACAGATTAATTGCTCCCATTTCACCACCATTGCCAGGCCAACTATTGGCAACAAAAAGAACCAGGAGATATGGGGCATCAAATGCCGACTGACACTGCAAAAGCCCAGTTGTCTATGA
Amino sequence
MLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQKPSCL*