ENST00000539735.5 COPS7A
Information
- Transcript ID
- ENST00000539735.5
- Genome
- hg38
- Position
- chr12:6,724,079-6,731,828
- Strand
- +
- CDS length
- 828
- Amino acid length
- 276
- Gene symbol
- COPS7A
- Gene type
- protein-coding
- Gene description
- COP9 signalosome subunit 7A
- Gene Entrez Gene ID
- 50813
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 6,724,079 | 6,724,250 |
| 2 | 6,724,614 | 6,724,818 |
| 3 | 6,727,926 | 6,728,001 |
| 4 | 6,728,223 | 6,728,311 |
| 5 | 6,729,247 | 6,729,449 |
| 6 | 6,730,402 | 6,730,507 |
| 7 | 6,730,669 | 6,730,820 |
| 8 | 6,731,000 | 6,731,828 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 6,724,657 | 6,724,818 |
| 3 | CDS | 6,727,926 | 6,728,001 |
| 4 | CDS | 6,728,223 | 6,728,311 |
| 5 | CDS | 6,729,247 | 6,729,449 |
| 6 | CDS | 6,730,402 | 6,730,507 |
| 7 | CDS | 6,730,669 | 6,730,820 |
| 8 | CDS | 6,731,000 | 6,731,039 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 6,833,245 | 6,840,994 | Link |
CDS sequence
ATGAGTGCGGAAGTGAAGGTGACAGGGCAGAACCAGGAGCAATTTCTGCTCCTAGCCAAGTCGGCCAAGGGGGCAGCGCTGGCCACACTCATCCATCAGGTGCTGGAGGCCCCTGGTGTCTACGTGTTTGGAGAACTGCTGGACATGCCCAATGTTAGAGAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTGCTCACAGTGTTTGCTTATGGGACATACGCTGACTACTTAGCTGAAGCCCGGAATCTTCCTCCACTAACAGAGGCTCAGAAGAATAAGCTTCGACACCTCTCAGTTGTCACCCTGGCTGCTAAAGTAAAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCTGGAAGACCTTGTGATTGAGGCTGTGTATGCTGACGTGCTTCGTGGCTCCCTGGACCAGCGCAACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCCCGAACCCTGCAGGAATGGTGTGTGGGCTGTGAGGTCGTGCTGTCAGGCATTGAGGAGCAGGTGAGCCGTGCCAACCAACACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATTGAGAGTGAGGTTGCCAACCTTAAAAAAACCATTAAAGTTACGACGGCAGCAGCAGCCGCAGCCACATCTCAGGACCCTGAGCAACACCTGACTGAGCTGAGGGAACCAGCTCCTGGCACCAACCAGCGCCAGCCCAGCAAGAAAGCCTCAAAGGGCAAGGGGCTCCGAGGGAGCGCCAAGATTTGGTCCAAGTCGAATTGA
Amino sequence
MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN*