ENST00000665485.1 SOX2-OT

Information
Transcript ID
ENST00000665485.1
Genome
hg19
Position
chr3:180,774,497-181,459,078
Strand
+
CDS length
0
Amino acid length
0
Gene symbol
SOX2-OT
Gene type
ncRNA
Gene description
SOX2 overlapping transcript
Gene Entrez Gene ID
347689
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 180,774,497 180,774,574
2 180,806,665 180,806,705
3 180,893,302 180,893,371
4 181,281,508 181,281,716
5 181,328,649 181,328,717
6 181,432,973 181,433,080
7 181,457,357 181,459,078
Other genome
Genome Chromosome Start End Links
hg38 chr3 181,056,709 181,741,290 Link
CDS sequence
Amino sequence