ENST00000646508.1 SOX2-OT

Information
Transcript ID
ENST00000646508.1
Genome
hg19
Position
chr3:180,707,578-180,848,784
Strand
+
CDS length
0
Amino acid length
0
Gene symbol
SOX2-OT
Gene type
ncRNA
Gene description
SOX2 overlapping transcript
Gene Entrez Gene ID
347689
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 180,707,578 180,707,640
2 180,748,358 180,748,477
3 180,774,485 180,774,574
4 180,806,665 180,806,705
5 180,847,709 180,848,784
Other genome
Genome Chromosome Start End Links
hg38 chr3 180,989,790 181,130,996 Link
CDS sequence
Amino sequence