ENST00000665187.1 SOX2-OT

Information
Transcript ID
ENST00000665187.1
Genome
hg19
Position
chr3:180,707,567-181,460,672
Strand
+
CDS length
0
Amino acid length
0
Gene symbol
SOX2-OT
Gene type
ncRNA
Gene description
SOX2 overlapping transcript
Gene Entrez Gene ID
347689
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 180,707,567 180,707,640
2 180,721,563 180,721,721
3 180,806,665 180,806,705
4 180,893,302 180,893,371
5 181,281,508 181,281,716
6 181,417,386 181,417,671
7 181,432,973 181,433,080
8 181,457,357 181,460,672
Other genome
Genome Chromosome Start End Links
hg38 chr3 180,989,779 181,742,884 Link
CDS sequence
Amino sequence