ENST00000543469.1 TRIM59
Information
- Transcript ID
- ENST00000543469.1
- Genome
- hg19
- Position
- chr3:160,150,233-160,166,725
- Strand
- -
- CDS length
- 972
- Amino acid length
- 324
- Gene symbol
- TRIM59
- Gene type
- protein-coding
- Gene description
- tripartite motif containing 59
- Gene Entrez Gene ID
- 286827
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
3 | 160,150,233 | 160,153,680 |
2 | 160,156,020 | 160,156,974 |
1 | 160,166,514 | 160,166,725 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
3 | CDS | 160,153,661 | 160,153,680 |
2 | CDS | 160,156,020 | 160,156,971 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr3 | 160,432,445 | 160,448,937 | Link |
CDS sequence
ATGCACAATTTTGAGGAAGAGTTAACTTGTCCCATATGTTATAGTATTTTTGAAGATCCTCGTGTACTGCCATGCTCTCATACATTTTGTAGAAATTGTTTGGAAAACATTCTTCAGGCATCTGGTAACTTTTATATATGGAGACCTTTACGAATTCCACTCAAGTGCCCTAATTGCAGAAGTATTACTGAAATTGCTCCAACTGGCATTGAATCTTTACCTGTTAATTTTGCACTAAGGGCTATTATTGAAAAGTACCAGCAAGAAGACCATCCAGATATTGTCACCTGCCCTGAACATTACAGGCAACCATTAAATGTTTACTGTCTATTAGATAAAAAATTAGTTTGTGGTCATTGCCTTACCATAGGTCAACATCATGGTCATCCTATAGATGACCTTCAAAGTGCCTATTTGAAAGAAAAGGACACTCCTCAAAAACTGCTTGAACAGTTGACTGACACACACTGGACAGATCTTACCCATCTTATTGAAAAGCTGAAAGAACAAAAATCTCATTCTGAGAAAATGATCCAAGGCGATAAGGAAGCTGTTCTCCAGTATTTTAAGGAGCTTAATGATACATTAGAACAGAAAAAAAAAAGTTTCCTAACGGCTCTCTGTGATGTTGGCAATCTAATTAATCAAGAATATACTCCACAAATTGAAAGAATGAAGGAAATACGAGAGCAGCAGCTTGAATTAATGGCACTGACAATATCTTTACAAGAAGAGTCTCCACTTAAATTTCTTGAAAAAGTTGATGATGTACGCCAGCATGTACAGATCTTGAAACAAAGACCACTTCCTGAGGTTCAACCCGTTGAAATTTATCCTCGAGTAAGCAAAATATTGAAAGAAGAATGGAGCAGAACAGAAATTGGACAAATTAAGAACGTTCTCATTCCCAAAATGAAAATTTCTCCAAAAAGGATGTCATGTTCCTGGCCTGATGAGGGAACTGACAAGTGA
Amino sequence
MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHCLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQGDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALTISLQEESPLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIKNVLIPKMKISPKRMSCSWPDEGTDK*