ENST00000309575.5 CHST2

Information
Transcript ID
ENST00000309575.5
Genome
hg19
Position
chr3:142,838,613-142,842,856
Strand
+
CDS length
1,593
Amino acid length
531
Gene symbol
CHST2
Gene type
protein-coding
Gene description
carbohydrate sulfotransferase 2
Gene Entrez Gene ID
9435
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 142,838,613 142,839,383
2 142,839,486 142,842,856
CDS
Exon number Type Start Stop
2 CDS 142,839,659 142,841,251
Other genome
Genome Chromosome Start End Links
hg38 chr3 143,119,771 143,124,014 Link
CDS sequence
ATGAGCCGCAGCCCGCAGCGAGCTCTGCCCCCGGGCGCGCTCCCTCGGCTGCTCCAGGCTGCGCCTGCAGCCGCGCCGCGTGCCCTGCTCCCGCAGTGGCCCCGGCGCCCAGGACGCCGCTGGCCCGCGTCCCCTCTCGGAATGAAGGTGTTCCGTAGGAAGGCGCTGGTGTTGTGCGCGGGCTATGCACTGCTGCTGGTGCTCACTATGCTCAACCTCCTGGACTACAAGTGGCACAAGGAGCCGCTGCAGCAGTGCAACCCCGATGGGCCGCTGGGTGCCGCAGCGGGGGCAGCCGGAGGCAGCTGGGGGCGCCCAGGGCCGCCTCCGGCCGGGCCGCCCCGTGCTCATGCCCGTTTGGACCTCCGCACTCCTTACCGCCCTCCCGCTGCCGCCGTCGGGGCGGCTCCTGCAGCCGCGGCAGGGATGGCGGGGGTTGCGGCCCCTCCAGGCAATGGCACTCGGGGCACCGGGGGCGTCGGGGACAAGCGGCAGCTGGTGTACGTGTTCACCACGTGGCGCTCTGGCTCGTCGTTCTTCGGCGAGCTATTCAACCAGAATCCCGAGGTGTTCTTTCTCTACGAGCCAGTGTGGCATGTATGGCAAAAACTGTATCCGGGGGACGCCGTTTCCCTGCAGGGGGCAGCGCGGGACATGCTGAGCGCTCTTTACCGCTGCGACCTCTCTGTCTTCCAGTTGTATAGCCCCGCGGGCAGCGGGGGGCGCAACCTCACCACGCTGGGCATCTTCGGCGCAGCCACCAACAAGGTGGTGTGCTCGTCACCACTCTGCCCCGCCTACCGCAAGGAGGTCGTGGGGTTGGTGGACGACCGCGTGTGCAAGAAGTGCCCGCCACAGCGCCTGGCGCGTTTCGAGGAGGAGTGCCGCAAGTACCGCACACTAGTCATAAAGGGTGTGCGCGTCTTCGACGTGGCGGTCTTGGCGCCACTGCTGCGAGACCCGGCCCTGGACCTCAAGGTCATCCACTTGGTGCGTGATCCCCGCGCGGTGGCGAGTTCACGGATCCGCTCGCGCCACGGCCTCATCCGTGAGAGCCTACAGGTGGTGCGCAGCCGAGACCCGCGAGCTCACCGCATGCCCTTCTTGGAGGCCGCGGGCCACAAGCTTGGCGCCAAGAAGGAGGGCGTGGGCGGCCCCGCAGACTACCACGCTCTGGGCGCTATGGAGGTCATCTGCAATAGTATGGCTAAGACGCTGCAGACAGCCCTGCAGCCCCCTGACTGGCTGCAGGGCCACTACCTGGTGGTGCGGTACGAGGACCTGGTGGGAGACCCCGTCAAGACACTACGGAGAGTGTACGATTTTGTGGGACTGTTGGTGAGCCCCGAAATGGAGCAGTTTGCCCTGAACATGACCAGTGGCTCGGGCTCCTCCTCCAAGCCTTTCGTGGTATCTGCACGCAATGCCACGCAGGCCGCCAATGCCTGGCGGACCGCCCTCACCTTCCAGCAGATCAAACAGGTGGAGGAGTTTTGCTACCAGCCCATGGCCGTCCTGGGCTATGAGCGGGTCAACAGCCCTGAGGAGGTCAAAGACCTCAGCAAGACCCTGCTTCGGAAGCCCCGTCTCTAA
Amino sequence
MSRSPQRALPPGALPRLLQAAPAAAPRALLPQWPRRPGRRWPASPLGMKVFRRKALVLCAGYALLLVLTMLNLLDYKWHKEPLQQCNPDGPLGAAAGAAGGSWGRPGPPPAGPPRAHARLDLRTPYRPPAAAVGAAPAAAAGMAGVAAPPGNGTRGTGGVGDKRQLVYVFTTWRSGSSFFGELFNQNPEVFFLYEPVWHVWQKLYPGDAVSLQGAARDMLSALYRCDLSVFQLYSPAGSGGRNLTTLGIFGAATNKVVCSSPLCPAYRKEVVGLVDDRVCKKCPPQRLARFEEECRKYRTLVIKGVRVFDVAVLAPLLRDPALDLKVIHLVRDPRAVASSRIRSRHGLIRESLQVVRSRDPRAHRMPFLEAAGHKLGAKKEGVGGPADYHALGAMEVICNSMAKTLQTALQPPDWLQGHYLVVRYEDLVGDPVKTLRRVYDFVGLLVSPEMEQFALNMTSGSGSSSKPFVVSARNATQAANAWRTALTFQQIKQVEEFCYQPMAVLGYERVNSPEEVKDLSKTLLRKPRL*