ENST00000643236.2 SOX2-OT

Information
Transcript ID
ENST00000643236.2
Genome
hg38
Position
chr3:180,989,771-181,741,401
Strand
+
CDS length
0
Amino acid length
0
Gene symbol
SOX2-OT
Gene type
ncRNA
Gene description
SOX2 overlapping transcript
Gene Entrez Gene ID
347689
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 180,989,771 180,989,852
2 181,003,775 181,003,933
3 181,088,877 181,088,978
4 181,563,720 181,563,928
5 181,610,861 181,610,929
6 181,739,569 181,741,401
Other genome
Genome Chromosome Start End Links
hg19 chr3 180,707,559 181,459,189 Link
CDS sequence
Amino sequence