ENST00000686643.1 POMGNT2

Information
Transcript ID
ENST00000686643.1
Genome
hg19
Position
chr3:43,120,867-43,147,350
Strand
-
CDS length
1,743
Amino acid length
581
Gene symbol
POMGNT2
Gene type
protein-coding
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
Gene Entrez Gene ID
84892
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 43,120,867 43,123,028
3 43,127,428 43,127,527
2 43,131,980 43,132,101
1 43,147,328 43,147,350
CDS
Exon number Type Start Stop
4 CDS 43,121,181 43,122,923
Other genome
Genome Chromosome Start End Links
hg38 chr3 43,079,375 43,105,858 Link
CDS sequence
ATGCACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGTCGGTGCTGGCAGCGGTCCTGTGGAAGCATGTGCGGCTGCGTGAGCATGCAGCCACACTGGAGGAGGAGCTGGCCCTCAGCCGACAGGCCACAGAGCCAGCCCCAGCACTGAGGATCGACTACCCGAAGGCACTGCAGATCCTGATGGAGGGCGGCACACACATGGTGTGCACGGGCCGCACGCACACAGACCGCATCTGCCGCTTCAAGTGGCTCTGCTACTCCAACGAGGCTGAGGAGTTCATCTTCTTCCATGGCAACACCTCTGTCATGCTGCCCAACCTGGGCTCCCGGCGCTTCCAGCCAGCCCTGCTCGACCTATCCACCGTGGAGGACCACAACACTCAGTACTTCAACTTCGTGGAGCTGCCTGCTGCTGCCCTGCGCTTCATGCCCAAGCCGGTGTTCGTGCCAGACGTGGCCCTCATCGCCAACCGCTTCAACCCCGACAACCTCATGCACGTCTTTCATGACGACCTGCTGCCACTCTTCTACACCCTGCGGCAGTTTCCCGGCCTGGCCCACGAGGCACGGCTCTTCTTCATGGAGGGCTGGGGCGAGGGTGCACACTTCGACCTCTACAAGCTGCTCAGCCCCAAGCAGCCTCTCCTGCGGGCACAGCTGAAGACCCTGGGCCGGCTGCTGTGCTTCTCCCATGCTTTTGTGGGCCTCTCCAAGATCACTACCTGGTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCATGACAGAAAAGCTGAACGTGAGCCACACAGGAGTCCCCCTAGGCGAGGAGTACATTCTGGTCTTTAGCCGAACCCAGAACAGACTCATTCTGAATGAGGCAGAGCTGCTGCTGGCACTGGCCCAGGAGTTCCAGATGAAGACAGTGACAGTGTCCCTGGAGGACCACACCTTTGCTGATGTCGTGCGGCTGGTCAGCAATGCCTCCATGCTGGTCAGCATGCATGGGGCCCAGCTGGTCACCACCCTCTTCCTGCCCCGTGGGGCAACTGTGGTAGAGCTCTTCCCATATGCTGTCAATCCCGACCACTACACTCCCTATAAGACGCTGGCCATGCTGCCTGGCATGGACCTCCAGTATGTAGCCTGGCGGAACATGATGCCAGAGAACACAGTCACACACCCTGAGCGGCCCTGGGATCAGGGGGGCATCACCCATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAACCCCGAGTGGCTCTTCCGAATCTACCAGGACACCAAGGTGGACATCCCGTCCCTCATTCAAACCATACGGCGCGTGGTGAAGGGCCGGCCAGGACCACGGAAGCAGAAGTGGACAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGAGGCCCGCCTCACTGTCTCCTGGCAGATCCCATGGAACCTTAAATACCTGAAGGTGAGGGAGGTGAAGTACGAGGTGTGGCTGCAGGAGCAGGGGGAGAACACCTACGTGCCTTACATCCTGGCTCTGCAGAACCACACCTTCACTGAGAACATCAAGCCCTTCACCACCTACCTGGTGTGGGTCCGCTGCATCTTCAACAAGATCCTCCTGGGACCCTTTGCAGATGTGCTGGTGTGCAACACGTAG
Amino sequence
MHLSAVFNALLVSVLAAVLWKHVRLREHAATLEEELALSRQATEPAPALRIDYPKALQILMEGGTHMVCTGRTHTDRICRFKWLCYSNEAEEFIFFHGNTSVMLPNLGSRRFQPALLDLSTVEDHNTQYFNFVELPAAALRFMPKPVFVPDVALIANRFNPDNLMHVFHDDLLPLFYTLRQFPGLAHEARLFFMEGWGEGAHFDLYKLLSPKQPLLRAQLKTLGRLLCFSHAFVGLSKITTWYQYGFVQPQGPKANILVSGNEIRQFARFMTEKLNVSHTGVPLGEEYILVFSRTQNRLILNEAELLLALAQEFQMKTVTVSLEDHTFADVVRLVSNASMLVSMHGAQLVTTLFLPRGATVVELFPYAVNPDHYTPYKTLAMLPGMDLQYVAWRNMMPENTVTHPERPWDQGGITHLDRAEQARILQSREVPRHLCCRNPEWLFRIYQDTKVDIPSLIQTIRRVVKGRPGPRKQKWTVGLYPGKVREARCQASVHGASEARLTVSWQIPWNLKYLKVREVKYEVWLQEQGENTYVPYILALQNHTFTENIKPFTTYLVWVRCIFNKILLGPFADVLVCNT*