ENST00000439365.6 NPAS1

Information
Transcript ID
ENST00000439365.6
Genome
hg38
Position
chr19:47,035,329-47,045,758
Strand
+
CDS length
705
Amino acid length
235
Gene symbol
NPAS1
Gene type
protein-coding
Gene description
neuronal PAS domain protein 1
Gene Entrez Gene ID
4861
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,035,329 47,035,358
2 47,035,964 47,036,129
3 47,039,036 47,039,151
4 47,039,407 47,039,564
5 47,040,444 47,040,550
6 47,041,025 47,041,125
7 47,042,810 47,042,904
8 47,045,191 47,045,758
CDS
Exon number Type Start Stop
2 CDS 47,035,970 47,036,129
3 CDS 47,039,036 47,039,151
4 CDS 47,039,407 47,039,564
5 CDS 47,040,444 47,040,550
6 CDS 47,041,025 47,041,125
7 CDS 47,042,810 47,042,872
Other genome
Genome Chromosome Start End Links
hg19 chr19 47,538,587 47,549,016 Link
CDS sequence
ATGACGGGCAGCAGCGTCTTCGACTACATTCACCCTGGGGACCACTCAGAGGTGCTGGAGCAACTGGGGCTGCGGACGCCGACGCCCGGCCCCCCAACCCCGCCCTCCGTCTCCTCTTCCTCCTCCTCTTCCTCTTCGCTTGCAGATACCCCCGAGATCGAGGCCAGCCTCACCAAGGTGCCCCCCTCCTCCCTGGTCCAGGAGCGCTCCTTCTTTGTCCGCATGAAATCCACGCTCACCAAGAGGGGGCTGCACGTCAAGGCCTCAGGGTACAAGGTCATCCACGTGACTGGGCGCCTTCGGGCCCACGCCCTGGGCCTTGTGGCCCTCGGGCACACGTTGCCCCCGGCCCCCCTGGCTGAGCTGCCACTCCATGGACACATGATCGTCTTCCGTCTCAGCCTGGGTCTCACCATCCTTGCTTGTGAGAGCAGAGTCAGCGACCACATGGACCTGGGGCCCTCAGAGCTGGTGGGCCGCAGCTGCTACCAGTTTGTCCACGGACAGGACGCCACGAGGATCCGCCAGAGCCACGTGGACTCGTGCCGGGGGCTTCGTGTGGCTGCAGTCTGTGGCCACAGTGGCTGGGAGCGGGAAGAGCCCCGGGGAGCACCATGTGCTTTGGGTCAGCCACGTGCTCAGCCAAGCCGAGGGTGGCCAAACTCCTTTGGATGCCTTCCAGCTTCCAGCCAGCGTGGCCTGTGA
Amino sequence
MTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRAHALGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHVDSCRGLRVAAVCGHSGWEREEPRGAPCALGQPRAQPSRGWPNSFGCLPASSQRGL*