ENST00000520821.6 RTL9

Information
Transcript ID
ENST00000520821.6
Genome
hg38
Position
chrX:110,358,848-110,456,334
Strand
+
CDS length
4,167
Amino acid length
1,389
Gene symbol
RTL9
Gene type
protein-coding
Gene description
retrotransposon Gag like 9
Gene Entrez Gene ID
57529
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 110,358,848 110,358,916
2 110,445,153 110,445,268
3 110,450,567 110,454,664
4 110,455,202 110,456,334
CDS
Exon number Type Start Stop
3 CDS 110,450,618 110,454,664
4 CDS 110,455,202 110,455,321
Other genome
Genome Chromosome Start End Links
hg19 chrX 109,602,076 109,699,562 Link
CDS sequence
ATGTCAATACCCTTACATTCACTGCGATTCAACAATACAATGAGGGAGGAAAATGTTGAGCCCCAAAACAAGCAGATGGCCTTCTGTAGACCAATGACAGAGACCAGAGCAGACGTACAGATTCTGCATTCTCATGTACAGTTGCCTATAGTCTCAACTTCAGCCTCAGACCCTGGAGGGACATCCACACAGTTGATGACATCTCCAGTCTTTGACACCATGTCTGCACCTCTAATGGGAGTACCAAACTCTGGAGCATTGTCCCCACCCCTAATGCCAGCCTCAGACTCTGGGGCACTTTCCCCATTGCTAATGCCAGCCTCAGACTCTGGGGCACTGTCCCCATTGCTAATGCCAGCCTTAGATTCTGGAACATTGTCCCCATTGCTGTCCACTTCAGAGTATGGGGTAATGTCCCCAGGGATGATGACAATTCCTGATTTTGGAACGATGTCCGCAACGCTAATGGTAGCACCAGATTCTGCAGAGATATCACCATTGGCAATGCCAGCTCCATCCTCTGGAGTGGTGTGTACACCTATAATGAGCACTTCATCCTCTGAGGCAATGTCCACACCATTAATGCTAGCCCCAGATTCTGGAGAGTTATCCCCAATTCTAATGCAAGATATGAATCCTGGAGTGATGTCTACACAGCCAGTGCCAGCTCCCAGCTCTGAGGCAATGTCCCCATTGCAAATTACAGATGAAGACACCGAAGCAATGTCCAAAGTGCTAATGACTGCTCTAGCCTCTGGAGAGATATCTTCGCTGCTAATGTCAGGCACGGACTCTGAAGCAATATCCTCACTGATAATGTCAGCTGTAGCTTCTGGAGGTACATCACCCCAGCCAACAAGCACCCAAAACTCTGGGGGAATACCTACCCCGCTCATGTCAGATCTAGACTCTGGAATAATGTCATCGCTTTTAATGTCATCTCCAGGCTCTGAAGTAATGTCCACACCGCTACTGTCAGTCCCAGATGCTGGAGAAATGTCCACATTACCAAAGCCAGCTCCAGATGCTGAAGCAATGTCCCCAGCACTAATGACGGCCCTACCCTCTGGAGTGATGCCCACCCAAACGATGCCAGCCCCAGGCTCTGGGGCGATGTCCCCATGGTCAACACAAAATGTAGACTCTGAAATGATGTCTAATCCGCCAGTGAGAGCAACAGCCTCTGGGGTGATGTCTGCACCACCAGTAAGAGCTTTAGATTCTGGAGCAATGTCCACACCGCTAATGGGAGCCCCAGCCTCTGGAAATATGTCTACATTGCAAAAGACAGTTCCAGCCTCTGGAGCCATGACCACCTCACTGATGACAGTCCCAAGCTCTGGAGTGATGTCCACAGAGCAAATGTCAGCCACAGCCTCTAGAGTAATGTCCGCACAGTTAACAATGGCCAAAACTTCTGGAGCAATGCCCACAGGCTCTATGAAAGCCGTGGCAAAACAATACAAGAGAGCCACAGCCTCTGGAAAGATGTCCACGCCACTGAGGAGAGCTCCAACTTCTGGAGCAATGTCCACCCAACCAGTTACGGCAACAGCCTCTGAAACAATGTCCATGCCACAATTGACAGTCCCAGCCTCTGGATCAATGTCCATGCTGCAAATGAGAGCCCCTGTCTCTGAAGCAATGTCCATGCCACAAATGAGAACCATGGCCTCAGGATTGACATCTGCAGCACAGATGAAAGCCATGACTTCTGGAGCAATGTCCACCCCACTAATGACAGCCCAAACCTCTGGATCAACATCCACGCTGTTAATGAGAGACACAGCCTCAGGAGTGATGTCCTGTCCACAAATGAGATCTCTGGCCTCTGGAGCATTGTCCAAGCCACTAATGACACCCAAAGCCTCAGGAACGATGTTCACGGAGAAAATGACAACCACAGCTTCTGAAGCAATGCCCACACTGCTAATGAGAGACACAGTTTCTGGAGCTCTGTCCATGCCGCAAATGACAGACACAGCCTCTGGAGGGTTGTCTGCATCGCTAATGAGAGACACAGCTTCTGGAGCAATGTCCACATCACAAATGACAGCCACAGTCTCTGGAGGGATGTCCATGCCACTAATGAGAGCTCAAGACCCAGGAGTAATGCCTGCCTCACTAATGAGAGCCAAAGTGTCTGGAAAGATGCTCAGTCAGCCAATGAGCACCCAAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACCAACAGTGAGAGCCTGGACCTCTGAAACAATGTCCACACCACTAATGAGAACCTCAGACCCTGGAGAGAGGCCCTCACTGCTCACAAGAGCTTCATCCTCTGGAGAGATGTCCCTACCACTAATGAGAGCTCCAGCTTCTGGAGAGATAGCCACGCCTCTGAGATCCCCAGCTTATGGAGCCATGTCTGCTCCACAAATGACAGCCACAGCCTCTGGAATGATGTCATCCATGCCACAAGTGAAGGCTCCCATCTCTGGAGCAATGTCCATGCCACTAACAAGATCCACAGCCTCTGGAGGGATGTCCATGCCACTGATGAGAGCCCCAGACTCTAGAGTGACATCCACATCACAAATGATGCCCACAGCTTCTGGAGACATGTGCACACTACCAGTGCGAGCCCCAGCCTCTGGAGGGGTGTCCTCACCACTAGTAAGAGCTCCAGCCTCTGGAACTATGTCCACACCACTAAGGAGACCCTCAGCCTGTGAGACTGTGTCCACAGAGTTAATGAGAGCTTCAGCCTCTGGACATATGTCCACTGCACAAACAACAGCCATGGTCTCTGGAGGGATGTCCAAGCCATTAATGAGAGCCCCGGCCTCTGGAACAATGCCCATGCCTTTAATGTCAGCCATGGCTTCTGGAGAGATGTCTATGCCGCTAATGGAAACCATGGCCTCTGGAGCAACGTCCACATTGCAAACCAGTGTTGCGAACTCTAGATCTATGTCCTTGTCACAAACAACATATACCGTGTCTGGAAGGATGGCCACAGCGCCAATTAGAGCCTCTGCTTCTGGAGCAAGGTCCACATCATTTATGAGAGCCTCAGTTTCTGGATCGATGCCCATGCCACTACCAAGAGCCACAGCCTCTGGATGTGGCATGGGTATGTCCATGCCACAAATGACAGCCACAGACTCTAGAGGGATGTCCACACCACTAATGAGGGCCTCAGGCCCTGGAACAATGTCCACACCACAGACAGCCTTTGGAGTGATGTCCACTCCGGAAATCAAAGCCACAGACTCTGGAGAGGCATCCACCTCTCACATTAACATCACAGCCTCTGGATCAAAGCCCACATCGCACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCACTCTGCTACCTCTTAGAAGAGCAGGAAGCAGCCCGGGGCTCATGCTCTGTGGAGGAAGAGATGGAGATTGATGAGGAGAAGCAAATGAAGGGGTTTTTGGACGATTCAGAGAGAATGGCATTTCTGGTATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGAACCTCTCTCACATGAAAATAAATCTTTCCTGAGAAGATCCCAGGGCATATATGACTCCCTATCTGAGATAGACATCCTCAGTGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCTGCTGGCCCGACATTTGTCTTGGTCTGATGCCATTCTACGGACCAGGTTTCTGGAAGGACTCTCAGAAGCTGTTACCACCAAAATGGGTCGGATCTTCCTGAAGGTGGCTGGCAGCCTAAAGGAGCTGATAGACAGGTCTCTGTACACCGAGTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAATGAGGAGGCCATGGGGAATGAACTGAGCTCTCAGCAGCAGACTGAGGAGCACCAGCATGTTTCCAAACGCTGTTACTACCTGAAAGAGCATGGAGACCCCCAAGAAGGTCTTCATGATCACCTTGGACAGAGCACAGGCCATCATCAGAAGGCCCATACCAACAAGTAA
Amino sequence
MSIPLHSLRFNNTMREENVEPQNKQMAFCRPMTETRADVQILHSHVQLPIVSTSASDPGGTSTQLMTSPVFDTMSAPLMGVPNSGALSPPLMPASDSGALSPLLMPASDSGALSPLLMPALDSGTLSPLLSTSEYGVMSPGMMTIPDFGTMSATLMVAPDSAEISPLAMPAPSSGVVCTPIMSTSSSEAMSTPLMLAPDSGELSPILMQDMNPGVMSTQPVPAPSSEAMSPLQITDEDTEAMSKVLMTALASGEISSLLMSGTDSEAISSLIMSAVASGGTSPQPTSTQNSGGIPTPLMSDLDSGIMSSLLMSSPGSEVMSTPLLSVPDAGEMSTLPKPAPDAEAMSPALMTALPSGVMPTQTMPAPGSGAMSPWSTQNVDSEMMSNPPVRATASGVMSAPPVRALDSGAMSTPLMGAPASGNMSTLQKTVPASGAMTTSLMTVPSSGVMSTEQMSATASRVMSAQLTMAKTSGAMPTGSMKAVAKQYKRATASGKMSTPLRRAPTSGAMSTQPVTATASETMSMPQLTVPASGSMSMLQMRAPVSEAMSMPQMRTMASGLTSAAQMKAMTSGAMSTPLMTAQTSGSTSTLLMRDTASGVMSCPQMRSLASGALSKPLMTPKASGTMFTEKMTTTASEAMPTLLMRDTVSGALSMPQMTDTASGGLSASLMRDTASGAMSTSQMTATVSGGMSMPLMRAQDPGVMPASLMRAKVSGKMLSQPMSTQDPGGMSMSPMKSMTAGGMQMNSPTSDVMSTPTVRAWTSETMSTPLMRTSDPGERPSLLTRASSSGEMSLPLMRAPASGEIATPLRSPAYGAMSAPQMTATASGMMSSMPQVKAPISGAMSMPLTRSTASGGMSMPLMRAPDSRVTSTSQMMPTASGDMCTLPVRAPASGGVSSPLVRAPASGTMSTPLRRPSACETVSTELMRASASGHMSTAQTTAMVSGGMSKPLMRAPASGTMPMPLMSAMASGEMSMPLMETMASGATSTLQTSVANSRSMSLSQTTYTVSGRMATAPIRASASGARSTSFMRASVSGSMPMPLPRATASGCGMGMSMPQMTATDSRGMSTPLMRASGPGTMSTPQTAFGVMSTPEIKATDSGEASTSHINITASGSKPTSHMTATTPETAKPPPKEVPSFGMLTPALCYLLEEQEAARGSCSVEEEMEIDEEKQMKGFLDDSERMAFLVSLHLGAAERWFILQMEVGEPLSHENKSFLRRSQGIYDSLSEIDILSAVLCHPKQGQKSVRQYATDFLLLARHLSWSDAILRTRFLEGLSEAVTTKMGRIFLKVAGSLKELIDRSLYTECQLAEEKDSPGNSSQVLPTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEHGDPQEGLHDHLGQSTGHHQKAHTNK*