ENST00000646446.1 RFX8

Information
Transcript ID
ENST00000646446.1
Genome
hg19
Position
chr2:102,013,823-102,091,165
Strand
-
CDS length
1,635
Amino acid length
545
Gene symbol
RFX8
Gene type
protein-coding
Gene description
regulatory factor X8
Gene Entrez Gene ID
731220
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
15 102,013,823 102,014,186
14 102,018,898 102,019,214
13 102,022,405 102,022,519
12 102,027,081 102,027,175
11 102,029,377 102,029,533
10 102,031,316 102,031,374
9 102,033,996 102,034,146
8 102,035,313 102,035,426
7 102,038,186 102,038,239
6 102,038,824 102,038,934
5 102,045,418 102,045,481
4 102,067,056 102,067,142
3 102,068,847 102,068,908
2 102,083,239 102,083,362
1 102,091,098 102,091,165
CDS
Exon number Type Start Stop
15 CDS 102,014,010 102,014,186
14 CDS 102,018,898 102,019,214
13 CDS 102,022,405 102,022,519
12 CDS 102,027,081 102,027,175
11 CDS 102,029,377 102,029,533
10 CDS 102,031,316 102,031,374
9 CDS 102,033,996 102,034,146
8 CDS 102,035,313 102,035,426
7 CDS 102,038,186 102,038,239
6 CDS 102,038,824 102,038,934
5 CDS 102,045,418 102,045,481
4 CDS 102,067,056 102,067,142
3 CDS 102,068,847 102,068,908
2 CDS 102,083,239 102,083,310
Other genome
Genome Chromosome Start End Links
hg38 chr2 101,397,361 101,474,703 Link
CDS sequence
ATGTATGAGATTTACGTGGAGACCTGTGGGCAAAACACTGAGAACCAAGTCAACCCGGCCACCTTTGGGAAGCTTGTGAGATTGGTTTTTCCGGACCTTGGCACCCGGAGGCTGGGCACTAGAGGAAGTGCCAGGTATCATTATGATGGAATCTGTATCAAGAAAAGCTCTTTCTTCTATGCCCAGTATTGCTACCTGATAGGTGAAAAAAGGTATCACAGTGGAGATGCCATTGCCTTTGAAAAATCTACTAATTATAACAGCATTATCCAACAAGAAGCAACATGTGAAGATCATTCACCGATGAAGACAGACCCAGTTGGATCCCCTTTGTCTGAATTCAGGAGATGTCCATTTCTGGAGCAAGAACAGGCAAAGAAATACTCCTGTAATATGATGGCCTTCCTTGCTGACGAATACTGCAACTATTGTCGAGACATTTTACGAAATGTGGAGGACTTGCTTACTTCCTTCTGGAAGTCTCTGCAGCAAGACACAGTCATGCTGATGTCATTGCCTGACGTGTGCCAGCTCTTTAAATGCTACGACGTCCAGCTGTACAAGGGAATTGAGGATGTTCTCCTTCATGACTTCTTGGAAGATGTTTCTATTCAGTACCTGAAATCTGTGCAGTTATTTAGTAAGAAATTTAAGCTGTGGCTCCTTAATGCTTTGGAAGGTGTTCCAGCCCTCTTGCAGATCTCCAAACTCAAAGAAGTTACTCTATTTGTCAAAAGACTAAGAAGAAAGACGTACCTTTCCAACATGGCTAAGACTATGCGAATGGTATTGAAAAGTAAGAGGCGTGTCAGCGTTTTGAAGTCAGATCTACAGGCCATCATCAATCAAGGCACTTTGGCTACTTCTAAGAAAGCCCTGGCAAGTGACCGGAGTGGCGCAGATGAACTGGAGAACAACCCAGAGATGAAATGTTTAAGAAACTTAATTTCTTTGCTGGGAACATCAACAGATCTCAGGGTATTCCTCAGCTGTCTGTCTTCACATCTCCAAGCATTTGTGTTCCAGACAAGCAGAAGCAAAGAAGAGTTTACCAAATTGGCCGCCAGCTTCCAGCTGAGATGGAATCTTCTTCTCACTGCTGTAAGCAAAGCCATGACCCTCTGCCACAGAGATAGTTTTGGCTCCTGGCATCTGTTTCACTTGTTGCTTTTGGAATATATGATTCATATACTTCAGTCATGCCTAGAGGAGGAAGAGGAGGAGGAGGACATGGGGACTGTCAAGGAAATGCTACCAGATGACCCGACTCTCGGCCAGCCAGACCAGGCACTTTTCCATTCTCTGAATTCCTCACTGTCGCAGGCGTGTGCCAGCCCCAGCATGGAGCCACTGGGGGTGATGCCCACACACATGGGCCAGGGCCGATATCCCGTGGGTGTGAGCAACATGGTCCTCAGGATCCTGGGCTTCCTGGTGGACACTGCCATGGGCAATAAGCTCATCCAGGTGCTGTTGGAAGATGAAACCACTGAAAGCGCAGTTAAACTCAGCCTTCCTATGGGACAAGAAGCCCTCATAACCCTAAAAGATGGACAACAATTTGTGATTCAGATATCAGATGTACCCCAAAGCTCTGAAGATATTTATTTCAGAGAAAACAATGCTAATGTGTGA
Amino sequence
MYEIYVETCGQNTENQVNPATFGKLVRLVFPDLGTRRLGTRGSARYHYDGICIKKSSFFYAQYCYLIGEKRYHSGDAIAFEKSTNYNSIIQQEATCEDHSPMKTDPVGSPLSEFRRCPFLEQEQAKKYSCNMMAFLADEYCNYCRDILRNVEDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKTYLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKCLRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTKLAASFQLRWNLLLTAVSKAMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVKEMLPDDPTLGQPDQALFHSLNSSLSQACASPSMEPLGVMPTHMGQGRYPVGVSNMVLRILGFLVDTAMGNKLIQVLLEDETTESAVKLSLPMGQEALITLKDGQQFVIQISDVPQSSEDIYFRENNANV*