ENST00000323853.10 SNRNP200

Information
Transcript ID
ENST00000323853.10
Genome
hg19
Position
chr2:96,940,076-96,971,284
Strand
-
CDS length
6,411
Amino acid length
2,137
Gene symbol
SNRNP200
Gene type
protein-coding
Gene description
small nuclear ribonucleoprotein U5 subunit 200
Gene Entrez Gene ID
23020
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
45 96,940,076 96,940,893
44 96,940,995 96,941,087
43 96,942,642 96,942,723
42 96,942,819 96,942,979
41 96,943,277 96,943,453
40 96,943,545 96,943,688
39 96,943,975 96,944,096
38 96,944,285 96,944,449
37 96,944,547 96,944,736
36 96,945,189 96,945,297
35 96,947,552 96,947,660
34 96,948,939 96,949,090
33 96,949,273 96,949,451
32 96,949,551 96,949,742
31 96,950,096 96,950,323
30 96,950,918 96,951,078
29 96,952,049 96,952,222
28 96,952,426 96,952,615
27 96,952,744 96,952,898
26 96,953,177 96,953,295
25 96,953,601 96,953,707
24 96,954,401 96,954,484
23 96,954,775 96,954,855
22 96,954,965 96,955,117
21 96,955,537 96,955,734
20 96,956,064 96,956,252
19 96,956,422 96,956,553
18 96,957,130 96,957,240
17 96,957,489 96,957,638
16 96,958,710 96,958,833
15 96,959,054 96,959,247
14 96,961,226 96,961,396
13 96,962,274 96,962,429
12 96,962,671 96,962,808
11 96,963,101 96,963,274
10 96,963,375 96,963,458
9 96,964,022 96,964,158
8 96,964,341 96,964,440
7 96,964,553 96,964,705
6 96,965,067 96,965,165
5 96,966,736 96,966,791
4 96,967,262 96,967,454
3 96,968,897 96,969,068
2 96,970,443 96,970,606
1 96,971,131 96,971,284
CDS
Exon number Type Start Stop
45 CDS 96,940,750 96,940,893
44 CDS 96,940,995 96,941,087
43 CDS 96,942,642 96,942,723
42 CDS 96,942,819 96,942,979
41 CDS 96,943,277 96,943,453
40 CDS 96,943,545 96,943,688
39 CDS 96,943,975 96,944,096
38 CDS 96,944,285 96,944,449
37 CDS 96,944,547 96,944,736
36 CDS 96,945,189 96,945,297
35 CDS 96,947,552 96,947,660
34 CDS 96,948,939 96,949,090
33 CDS 96,949,273 96,949,451
32 CDS 96,949,551 96,949,742
31 CDS 96,950,096 96,950,323
30 CDS 96,950,918 96,951,078
29 CDS 96,952,049 96,952,222
28 CDS 96,952,426 96,952,615
27 CDS 96,952,744 96,952,898
26 CDS 96,953,177 96,953,295
25 CDS 96,953,601 96,953,707
24 CDS 96,954,401 96,954,484
23 CDS 96,954,775 96,954,855
22 CDS 96,954,965 96,955,117
21 CDS 96,955,537 96,955,734
20 CDS 96,956,064 96,956,252
19 CDS 96,956,422 96,956,553
18 CDS 96,957,130 96,957,240
17 CDS 96,957,489 96,957,638
16 CDS 96,958,710 96,958,833
15 CDS 96,959,054 96,959,247
14 CDS 96,961,226 96,961,396
13 CDS 96,962,274 96,962,429
12 CDS 96,962,671 96,962,808
11 CDS 96,963,101 96,963,274
10 CDS 96,963,375 96,963,458
9 CDS 96,964,022 96,964,158
8 CDS 96,964,341 96,964,440
7 CDS 96,964,553 96,964,705
6 CDS 96,965,067 96,965,165
5 CDS 96,966,736 96,966,791
4 CDS 96,967,262 96,967,454
3 CDS 96,968,897 96,969,068
2 CDS 96,970,443 96,970,606
1 CDS 96,971,131 96,971,175
Other genome
Genome Chromosome Start End Links
hg38 chr2 96,274,338 96,305,546 Link
CDS sequence
ATGGCGGATGTAACCGCCCGTAGTCTGCAATACGAGTACAAGGCGAACTCGAATCTTGTGCTCCAAGCTGACCGTTCTCTCATTGACCGGACCCGCCGGGATGAACCCACAGGAGAGGTGCTGTCCCTTGTTGGGAAGCTGGAGGGCACCCGTATGGGAGACAAGGCTCAACGGACCAAACCGCAGATGCAGGAGGAAAGAAGAGCCAAGCGAAGAAAGCGTGATGAGGACCGGCATGACATCAACAAGATGAAGGGTTATACTCTGCTGTCGGAGGGCATTGATGAGATGGTGGGCATCATCTACAAGCCCAAAACTAAAGAGACTCGGGAGACCTATGAGGTGCTACTCAGCTTCATCCAGGCTGCTCTTGGGGACCAGCCACGTGATATCCTTTGTGGGGCAGCTGATGAAGTTCTAGCTGTTCTAAAGAATGAAAAGCTGCGGGACAAGGAAAGGCGAAAGGAGATTGACCTGCTGCTGGGTCAAACAGATGATACCAGATACCATGTGCTAGTGAACCTGGGCAAAAAGATCACAGACTATGGTGGAGATAAGGAAATCCAAAATATGGATGACAACATTGATGAGACATACGGTGTGAATGTGCAGTTTGAGTCTGATGAGGAGGAAGGTGATGAAGACGTATACGGGGAGGTTCGAGAAGAGGCATCTGATGATGACATGGAAGGGGACGAGGCTGTCGTGCGCTGCACCCTCTCGGCTAATCTCGTAGCCTCAGGTGAACTGATGAGTTCCAAGAAGAAGGATTTGCACCCTCGGGATATTGATGCATTTTGGCTGCAGCGGCAGCTCAGTCGTTTCTATGATGATGCCATCGTGTCGCAGAAGAAGGCAGATGAAGTATTGGAGATTTTGAAGACGGCCAGTGATGATCGGGAATGTGAAAATCAGCTGGTTCTGCTGCTTGGTTTCAACACCTTTGATTTCATTAAAGTGTTGCGGCAGCACAGGATGATGATTTTATACTGTACCTTGCTGGCCAGTGCACAAAGTGAAGCTGAAAAGGAAAGGATTATGGGAAAGATGGAAGCTGACCCAGAGCTATCCAAGTTCCTCTACCAGCTTCATGAAACCGAGAAGGAGGATCTGATCCGAGAGGAAAGGTCCCGGAGAGAGCGAGTGCGTCAGTCTCGAATGGACACAGATCTGGAAACCATGGATCTCGACCAGGGTGGAGAGGCACTGGCTCCACGGCAGGTTCTGGACTTGGAGGACCTGGTTTTTACCCAAGGGAGCCACTTTATGGCCAATAAACGCTGTCAGCTTCCTGATGGATCCTTCCGTCGCCAGCGTAAGGGCTATGAAGAGGTGCATGTGCCTGCTCTGAAGCCCAAGCCCTTTGGCTCAGAAGAACAACTGCTTCCAGTGGAAAAGCTGCCAAAGTATGCCCAGGCTGGGTTTGAGGGCTTCAAAACACTGAATCGGATCCAGAGTAAGCTCTACCGTGCTGCCCTTGAGACGGATGAGAATCTGCTGCTGTGTGCTCCTACTGGTGCTGGGAAGACCAACGTGGCCCTGATGTGCATGCTCCGAGAGATTGGGAAACACATAAACATGGACGGCACCATCAATGTGGATGACTTCAAGATTATCTACATTGCCCCCATGCGCTCCTTGGTGCAGGAGATGGTGGGCAGCTTTGGAAAGCGCCTGGCCACTTATGGCATCACTGTTGCTGAACTGACTGGGGACCACCAGCTGTGCAAAGAAGAGATCAGTGCCACTCAGATCATCGTCTGCACCCCCGAGAAGTGGGACATCATCACCCGCAAGGGTGGTGAGCGCACCTACACCCAGCTGGTGCGGCTCATCATTCTGGATGAGATTCATCTTCTCCACGATGACAGAGGTCCTGTCTTAGAAGCTTTAGTGGCCAGGGCCATCCGAAACATTGAGATGACCCAAGAGGATGTCCGACTCATTGGTCTCAGTGCCACCCTACCCAACTATGAAGATGTAGCCACCTTTCTACGTGTTGACCCTGCCAAGGGTCTCTTTTACTTTGACAACAGCTTCCGTCCAGTGCCTCTGGAACAGACATATGTGGGTATCACAGAGAAAAAAGCTATCAAGCGTTTCCAGATCATGAATGAAATCGTCTATGAAAAAATCATGGAACATGCTGGAAAAAATCAGGTGCTGGTGTTTGTCCACTCCCGGAAGGAGACTGGAAAGACAGCCAGGGCCATCCGGGACATGTGCCTAGAAAAGGACACTCTGGGTCTGTTTCTGAGGGAGGGCTCAGCCTCCACAGAAGTCCTGCGAACAGAAGCTGAGCAGTGCAAGAACCTAGAGCTGAAGGATCTTCTGCCTTATGGCTTTGCTATTCATCACGCAGGCATGACCAGGGTTGACCGAACACTCGTGGAGGATCTTTTTGCTGATAAACATATTCAGGTTTTAGTTTCCACAGCAACTCTAGCTTGGGGTGTGAATCTCCCTGCACATACAGTCATCATCAAAGGCACCCAGGTGTACAGTCCAGAGAAGGGGCGTTGGACAGAACTGGGAGCACTGGACATTCTGCAGATGCTGGGACGTGCCGGAAGACCCCAGTATGACACCAAGGGTGAAGGCATACTCATCACATCTCATGGGGAGCTACAGTACTACCTGTCCCTCCTCAATCAACAACTTCCTATTGAAAGCCAGATGGTTTCAAAGCTTCCTGACATGCTCAATGCAGAAATCGTGCTAGGAAATGTCCAGAATGCCAAGGATGCGGTGAACTGGCTGGGCTATGCCTACCTCTATATCCGAATGCTGCGATCCCCAACCCTCTATGGCATCTCTCATGATGACCTCAAGGGAGATCCCCTGCTGGACCAGCGCCGACTAGATCTGGTTCATACAGCTGCCCTGATGCTGGACAAGAACAATCTGGTCAAGTACGACAAGAAGACGGGCAACTTCCAGGTGACAGAACTGGGCCGTATAGCCAGCCACTACTACATCACCAATGATACAGTGCAGACTTACAACCAGCTGCTGAAGCCCACCCTGAGTGAGATTGAGCTTTTCAGGGTCTTCTCATTGTCCTCTGAGTTCAAGAACATCACAGTGAGAGAGGAGGAGAAGCTGGAGCTGCAGAAGTTGCTGGAGAGGGTGCCTATCCCTGTAAAGGAGAGCATTGAGGAACCCAGTGCTAAGATCAACGTTCTTCTGCAAGCCTTCATCTCACAGCTGAAATTGGAGGGCTTTGCACTGATGGCTGACATGGTGTATGTCACACAGTCGGCTGGCCGGTTGATGCGAGCGATATTTGAAATTGTCCTGAACCGAGGTTGGGCACAGCTTACAGACAAGACCCTGAACCTCTGCAAGATGATCGACAAACGCATGTGGCAGTCCATGTGTCCTCTGCGCCAGTTCCGGAAACTCCCTGAGGAAGTAGTGAAGAAGATTGAGAAGAAGAATTTCCCCTTTGAGCGTCTGTACGACCTGAATCATAATGAGATTGGGGAGCTTATCCGCATGCCAAAGATGGGGAAGACCATCCACAAATATGTCCATCTGTTTCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATCACACGCTCCACCCTGAAGGTGGAGCTGACCATCACGCCAGACTTCCAGTGGGATGAAAAGGTGCATGGTTCATCCGAGGCTTTTTGGATTCTGGTGGAGGATGTGGACAGCGAGGTGATTCTGCACCATGAGTATTTTCTCCTCAAGGCCAAGTACGCCCAGGACGAGCACCTCATTACATTCTTCGTGCCTGTCTTTGAACCGCTGCCCCCTCAGTACTTCATCCGAGTGGTGTCTGACCGCTGGCTCTCTTGTGAGACCCAGCTGCCTGTCTCCTTCCGGCACCTGATCTTGCCGGAGAAGTACCCCCCTCCAACCGAACTTTTGGACCTGCAGCCCTTGCCCGTGTCTGCTCTGAGAAACAGTGCCTTTGAGAGTCTTTACCAAGATAAATTTCCTTTCTTCAATCCCATCCAGACCCAGGTGTTTAACACTGTATACAACAGTGACGACAACGTGTTTGTGGGGGCCCCCACGGGCAGCGGGAAGACTATTTGTGCAGAGTTTGCCATCCTGCGAATGCTGCTGCAGAGCTCGGAGGGGCGCTGTGTGTACATCACCCCCATGGAGGCCCTGGCAGAGCAGGTATACATGGACTGGTACGAGAAGTTCCAGGACAGGCTCAACAAGAAGGTGGTACTCCTGACAGGCGAGACCAGCACAGACCTGAAGCTGCTGGGCAAAGGGAACATTATCATCAGCACCCCTGAGAAGTGGGACATACTTTCCCGGCGATGGAAGCAGCGCAAGAACGTGCAGAACATCAACCTCTTCGTGGTGGATGAGGTCCACCTTATCGGGGGCGAGAATGGGCCTGTCTTAGAAGTGATCTGCTCCCGAATGCGCTACATCTCCTCCCAGATTGAGCGGCCCATTCGCATTGTGGCACTCAGCTCTTCGCTCTCCAATGCCAAGGATGTGGCCCACTGGCTGGGCTGCAGTGCCACCTCCACCTTCAACTTCCATCCCAATGTGCGTCCCGTCCCCTTGGAGCTGCACATCCAGGGCTTCAACATCAGCCATACACAAACCCGCCTGCTCTCCATGGCCAAGCCTGTGTACCATGCTATCACCAAGCACTCGCCCAAGAAGCCTGTCATTGTCTTTGTGCCGTCTCGCAAGCAGACCCGCCTCACTGCCATTGACATCCTCACCACCTGTGCAGCAGACATCCAACGGCAGAGGTTCTTGCACTGCACCGAGAAGGATCTGATTCCGTACCTGGAGAAGCTAAGTGACAGCACGCTCAAGGAAACGCTGCTAAATGGGGTGGGCTACCTGCATGAGGGGCTCAGCCCCATGGAGCGACGCCTGGTGGAGCAGCTCTTCAGCTCAGGGGCTATCCAGGTGGTGGTGGCTTCTCGGAGTCTCTGCTGGGGCATGAACGTGGCTGCCCACCTGGTAATCATCATGGATACCCAGTACTACAATGGCAAGATCCACGCCTATGTGGATTACCCCATCTATGACGTGCTTCAGATGGTGGGCCACGCCAACCGCCCTTTGCAGGACGATGAGGGGCGCTGTGTCATCATGTGTCAGGGCTCCAAGAAGGATTTCTTCAAGAAGTTCTTATATGAGCCATTGCCAGTAGAATCTCACCTGGACCACTGTATGCATGACCACTTCAATGCTGAGATCGTCACCAAGACCATTGAGAACAAGCAGGATGCTGTGGACTACCTCACCTGGACCTTTCTGTACCGCCGCATGACACAGAACCCCAATTACTACAACCTGCAGGGCATCTCCCATCGTCACTTGTCGGACCACTTGTCAGAGCTGGTGGAGCAGACCCTGAGTGACCTGGAGCAGTCCAAGTGCATCAGCATCGAGGACGAGATGGACGTGGCGCCTCTGAACCTAGGCATGATCGCCGCCTACTATTACATCAACTACACCACCATTGAGCTCTTCAGCATGTCCCTCAATGCCAAGACCAAGGTGCGAGGGCTTATCGAGATCATCTCCAATGCAGCAGAGTATGAGAACATTCCCATCCGGCACCATGAAGACAATCTCCTGAGGCAGTTGGCTCAGAAGGTCCCCCACAAGCTGAATAACCCTAAGTTCAATGATCCGCACGTCAAGACCAACCTGCTCCTGCAGGCTCACTTGTCTCGCATGCAGCTGAGTGCTGAGTTGCAGTCAGATACGGAGGAAATCCTTAGTAAGGCAATCCGGCTCATCCAGGCCTGCGTGGATGTCCTTTCCAGCAATGGGTGGCTCAGCCCTGCTCTGGCAGCTATGGAACTGGCCCAGATGGTCACCCAAGCCATGTGGTCCAAGGACTCATACCTGAAGCAGCTGCCACACTTCACCTCTGAGCATATCAAACGTTGCACAGACAAGGGAGTGGAGAGTGTTTTCGACATCATGGAGATGGAGGATGAAGAACGGAACGCGTTGCTTCAGCTGACTGACAGCCAGATTGCAGATGTGGCTCGCTTTTGTAACCGCTACCCTAATATCGAACTATCTTATGAGGTGGTAGATAAGGACAGCATCCGCAGTGGCGGGCCAGTTGTGGTGCTGGTGCAGCTGGAGCGAGAGGAGGAAGTCACAGGCCCTGTCATTGCGCCTCTCTTCCCGCAGAAACGTGAAGAGGGCTGGTGGGTGGTGATTGGAGATGCCAAGTCCAATAGCCTCATCTCCATCAAGAGGCTGACCTTGCAGCAGAAGGCCAAGGTGAAGTTGGACTTTGTGGCCCCAGCCACTGGTGCCCACAACTACACTCTGTACTTCATGAGTGACGCTTACATGGGATGTGACCAGGAGTACAAATTCAGCGTGGATGTGAAAGAAGCTGAGACAGACAGTGATTCAGATTGA
Amino sequence
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTKPQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFIQAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKITDYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTLSANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVVKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD*